RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZNF142P52746 1687 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 EIF3FO00303 357 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 BMP2P12643 396 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 NCCRP1Q6ZVX7 275 aaPredicted RBP20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 PDZD3Q86UT5 571 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 SULT4A1Q9BR01 284 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 SLC25A18Q9H1K4 315 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 FAM86C1Q9NVL1 165 aa20.91■□□□□ 0.94
TM9SF3-201ENST00000371142 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 H3BUI4 141 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 TNFSF12O43508 249 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 FUT1P19526 365 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 AQP2P41181 271 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 HTR2BP41595 481 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 SERTAD2Q14140 314 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 KRBOX4Q5JUW0 171 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 LCTLQ6UWM7 567 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 CDK2P24941 298 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 PCGF2P35227 344 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 OR7A5Q15622 319 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 PAPOLGQ9BWT3 736 aaKnown RBP20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 LMAN1LQ9HAT1 526 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 B3GNT3Q9Y2A9 372 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 A0A0J9YY10 115 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 MPIG6BO95866 241 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 PRDX3P30048 256 aaKnown RBP20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 WNT4P56705 351 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 FNDC8Q8TC99 324 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 RNASET2O00584 256 aaKnown RBP20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 ACTL6BO94805 426 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 TIMP1P01033 207 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 HOXC5Q00444 222 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 KDELC1Q6UW63 502 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 PAPD5Q8NDF8 572 aaKnown RBP20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 IL17CQ9P0M4 197 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 BTNL2Q9UIR0 455 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 CDK5R2Q13319 367 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 PLGLAQ15195 96 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 SFXN2Q96NB2 322 aa20.9■□□□□ 0.94
TM9SF3-201ENST00000371142 SCGB2A1O75556 95 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 PABPC4LP0CB38 370 aaKnown RBP20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 FOLR3P41439 243 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 LUMP51884 338 aaPredicted RBP20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 ANKRD54Q6NXT1 300 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 GPR150Q8NGU9 434 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 TMEM239Q8WW34 195 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 SYT3Q9BQG1 590 aa20.89■□□□□ 0.94
TM9SF3-201ENST00000371142 UGDHO60701 494 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 SDC1P18827 310 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 DCTP40126 519 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 PSMB10P40306 273 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 OR52E1Q8NGJ3 308 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 NXF5Q9H1B4 397 aaKnown RBP20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 SDR39U1Q9NRG7 319 aaPredicted RBP20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 MEIS3P1A6NDR6 274 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF28P17035 718 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 GSCP56915 257 aaPredicted RBP20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 VWA5B2Q8N398 1253 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 ABRACLQ9P1F3 81 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 PRSS21Q9Y6M0 314 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 ANTXRLA6NF34 631 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 OPN1LWP04000 364 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 A0A0G2JMP0 313 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 UBL4AP11441 157 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 PPP5CP53041 499 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 OR4M2Q8NGB6 313 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC30A3Q99726 388 aa20.89■□□□□ 0.93
TM9SF3-201ENST00000371142 RETP07949 1114 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 ACY1Q03154 408 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC22A10Q63ZE4 541 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 PHB2Q99623 299 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 CRABP1P29762 137 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 RAB4BP61018 213 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 CLDN10P78369 228 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 DCST2Q5T1A1 773 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 PDZD9Q8IXQ8 264 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 PIANPQ8IYJ0 282 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 OR52R1Q8NGF1 315 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 SSX3Q99909 188 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 RDH14Q9HBH5 336 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 SCML1Q9UN30 329 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 MPPED1O15442 326 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 CNMDO75829 334 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 SERPINA5P05154 406 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 APLNRP35414 380 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 MRPL21Q7Z2W9 205 aaKnown RBP20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 SFXN5Q8TD22 340 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 TMIGD2Q96BF3 282 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 PBDC1Q9BVG4 233 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 ITGB7P26010 798 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 PRSS3P35030 304 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 DAP3P51398 398 aaKnown RBP20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 CHFRQ96EP1 664 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 RABL2AQ9UBK7 228 aaPredicted RBP20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 RABL2BQ9UNT1 228 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 RHBDD3Q9Y3P4 386 aa20.88■□□□□ 0.93
TM9SF3-201ENST00000371142 ACOT4Q8N9L9 421 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 THSD1Q9NS62 852 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 LYRM1O43325 122 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 NUDT21O43809 227 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms