RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 KCNA7Q96RP8 456 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 CCDC106Q9BWC9 280 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 OR2B2Q9GZK3 357 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 NXF5Q9H1B4 397 aaKnown RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 TUBB1Q9H4B7 451 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 SRA1Q9HD15 236 aaKnown RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 GALNT8Q9NY28 637 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 MAPRE3Q9UPY8 281 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 EXO1Q9UQ84 846 aaKnown RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF780BQ9Y6R6 833 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 MED12Q93074 2177 aa11.28□□□□□ -0.6
MRPL55-209ENST00000366735 DSCAMO60469 2012 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 GOLGA8QA0A0J9YX86 632 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 GOLGA8OA6NCC3 632 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 A6NJY4 79 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 GOLGA8NF8WBI6 632 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PIP5K1BO14986 540 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 SKAP2O75563 359 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 ERAL1O75616 437 aaKnown RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 INHBBP09529 407 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PRDX6P30041 224 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 CPOXP36551 454 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 NEK2P51955 445 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 AGFG1P52594 562 aaKnown RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PSMA6P60900 246 aaKnown RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 NCALDP61601 193 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 MAP4K2Q12851 820 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 NNATQ16517 81 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PRICKLE4Q2TBC4 344 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 SLC48A1Q6P1K1 146 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 P4HA3Q7Z4N8 544 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 LUZP2Q86TE4 346 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 TREML1Q86YW5 311 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 CDYL2Q8N8U2 506 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 ADCY4Q8NFM4 1077 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 METTL6Q8TCB7 284 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 TUBA1CQ9BQE3 449 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 ITPAQ9BY32 194 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-209ENST00000366735 SERHLQ9NQF3 203 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 ARL8BQ9NVJ2 186 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 DKKL1Q9UK85 242 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PACSIN3Q9UKS6 424 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 SNX6Q9UNH7 406 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 FIS1Q9Y3D6 152 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.61
MRPL55-209ENST00000366735 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 OR6C70A6NIJ9 312 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 WASHC1A8K0Z3 465 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 E9PBE3 544 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 ICOSLGO75144 302 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 HRGP04196 525 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 CALB2P22676 271 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 IL12BP29460 328 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 SRD5A2P31213 254 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 HOXC12P31275 282 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 RASSF2P50749 326 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 ATP4BP51164 291 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 CORO7P57737 925 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 TRA2BP62995 288 aaKnown RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 NKX6-1P78426 367 aaPredicted RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 MRPS22P82650 360 aaKnown RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 SRYQ05066 204 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 LTBQ06643 244 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 EFR3AQ14156 821 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 POU4F3Q15319 338 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 NXNQ6DKJ4 435 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 OR2A2Q6IF42 318 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 OGFOD2Q6N063 350 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 COMMD6Q7Z4G1 85 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 PLCZ1Q86YW0 608 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 METTL4Q8N3J2 472 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 HGDQ93099 445 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 PIGTQ969N2 578 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 SFXN2Q96NB2 322 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 COL21A1Q96P44 957 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 CDK15Q96Q40 435 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 MRPL1Q9BYD6 325 aaKnown RBP11.26□□□□□ -0.61
MRPL55-209ENST00000366735 BRF2Q9HAW0 419 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 GIMAP4Q9NUV9 329 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 ZNF226Q9NYT6 803 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 TAS2R10Q9NYW0 307 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 MAT2BQ9NZL9 334 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 ARMCX1Q9P291 453 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 DTX4Q9Y2E6 619 aa11.26□□□□□ -0.61
MRPL55-209ENST00000366735 DLGAP4Q9Y2H0 992 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms