RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 UHRF2Q96PU4 802 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 B3GALT1Q9Y5Z6 326 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 A0A0U1RQK1 487 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 K7EPK0 472 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 NFKBIEO00221 500 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 SBK2P0C263 348 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 KCNQ1P51787 676 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 HTRA4P83105 476 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 PLCXD2Q0VAA5 305 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ZNF791Q3KP31 576 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 ZNF805Q5CZA5 627 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PARP16Q8N5Y8 322 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ADGRB2O60241 1585 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 ZNF43P17038 809 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 FASLGP48023 281 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 POU3F4P49335 361 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 UBE2NP61088 152 aaKnown RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 RNF4P78317 190 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 OPCMLQ14982 345 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PLBD1Q6P4A8 553 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 TSSK4Q6SA08 328 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ZNF705AQ6ZN79 300 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 DEFB119Q8N690 84 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 STEAP2Q8NFT2 490 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 DAZAP1Q96EP5 407 aaKnown RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 SYNPO2LQ9H987 977 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PCDHGA7Q9Y5G6 932 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 CLN5O75503 358 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 KCNK2O95069 426 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 KNG1P01042 644 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 RNH1P13489 461 aaKnown RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 DCTP40126 519 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 AGTR2P50052 363 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMC4-202ENST00000357388 OR7G3Q8NG95 312 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 SYNPRQ8TBG9 265 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 BTBD2Q9BX70 525 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 A0A1W2PQ09 198 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 SLC22A23A1A5C7 686 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 MTMR11A4FU01 709 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ADAM12O43184 909 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 SYT7O43581 403 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ACVRL1P37023 503 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 CPT1CQ8TCG5 803 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 TMIGD2Q96BF3 282 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 PITHD1Q9GZP4 211 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 OR6C2Q9NZP2 312 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 B4GALT6Q9UBX8 382 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 EIF3FO00303 357 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 BHLHE40O14503 412 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PIP5K1CO60331 668 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 ACTL6BO94805 426 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 P04436 131 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 MGAT3Q09327 533 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 GBX1Q14549 363 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 IGDCC3Q8IVU1 814 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 GAB3Q8WWW8 586 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 C1orf74Q96LT6 269 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PSD2Q9BQI7 771 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 MTHFD2LQ9H903 347 aaPredicted RBP12.17□□□□□ -0.46
SMC4-202ENST00000357388 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
SMC4-202ENST00000357388 PPP1R2P9O14990 202 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 AQP9O43315 295 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 ZNF217O75362 1048 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 GSRP00390 522 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RAB3AP20336 220 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 RABGGTBP53611 331 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TLE4Q04727 773 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 UBE2NLQ5JXB2 153 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TXNRD3NBQ6F5E7 133 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 PLXDC1Q8IUK5 500 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 GLIS1Q8NBF1 620 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 SEMA6DQ8NFY4 1073 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 HRH4Q9H3N8 390 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 NMNAT1Q9HAN9 279 aaPredicted RBP12.16□□□□□ -0.46
SMC4-202ENST00000357388 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 ANHXE9PGG2 379 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 NDUFB2O95178 105 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 CRABP1P29762 137 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 PCGF2P35227 344 aa12.16□□□□□ -0.46
SMC4-202ENST00000357388 TMPRSS9Q7Z410 1059 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms