RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ACAD8Q9UKU7 415 aa18.99■□□□□ 0.63
TRIM4-202ENST00000354241 PCDHGB5Q9Y5G0 923 aa18.99■□□□□ 0.63
TRIM4-202ENST00000354241 OTOGLQ3ZCN5 2332 aa18.99■□□□□ 0.63
TRIM4-202ENST00000354241 WDR87Q6ZQQ6 2873 aa18.99■□□□□ 0.63
TRIM4-202ENST00000354241 TRBV4-1A0A0J9YWV2 114 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 FRG2CA6NGY1 282 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 SAGE2PA6NJ88 616 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 GUSBP08236 651 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 CCNYL3P0C7X3 344 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 HMGA2P52926 109 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 HOXC5Q00444 222 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 EPS8Q12929 822 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 DECR1Q16698 335 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 RNF220Q5VTB9 566 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 FAHD1Q6P587 224 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 FAM198BQ6UWH4 519 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 TSPYL5Q86VY4 417 aaPredicted RBP18.98■□□□□ 0.63
TRIM4-202ENST00000354241 OR9Q2Q8NGE9 314 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 ADIPOR1Q96A54 375 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 EFHD2Q96C19 240 aaPredicted RBP18.98■□□□□ 0.63
TRIM4-202ENST00000354241 DEPDC7Q96QD5 511 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 KRT84Q9NSB2 600 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 TMCC3Q9ULS5 477 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 OR6C76A6NM76 312 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 CPSF4LA6NMK7 179 aaKnown RBP18.98■□□□□ 0.63
TRIM4-202ENST00000354241 AP3D1O14617 1153 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 TPST2O60704 377 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 STK17BO94768 372 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 CLIC3O95833 236 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 GNAO1P09471 354 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 DRD5P21918 477 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 NBL1P41271 181 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 SMIM11AP58511 58 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 TAS2R41P59536 307 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 ADARB1P78563 741 aaKnown RBP18.98■□□□□ 0.63
TRIM4-202ENST00000354241 RFX4Q33E94 735 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 HES3Q5TGS1 186 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 FAM69BQ5VUD6 431 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 AP1ARQ63HQ0 302 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 SLC5A8Q8N695 610 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 AMER2Q8N7J2 671 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 PIK3C3Q8NEB9 887 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 ZNF555Q8NEP9 628 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 DHRS1Q96LJ7 313 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 TAAR9Q96RI9 348 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 FEVQ99581 238 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 NRSN2Q9GZP1 204 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 ARMC7Q9H6L4 198 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 C19orf25Q9UFG5 118 aaPredicted RBP18.98■□□□□ 0.63
TRIM4-202ENST00000354241 PCDHGA10Q9Y5H3 936 aa18.98■□□□□ 0.63
TRIM4-202ENST00000354241 H0YAE9 185 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 ELAVL4P26378 380 aaKnown RBP18.97■□□□□ 0.63
TRIM4-202ENST00000354241 DCAF7P61962 342 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 KCNAB2Q13303 367 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIM4-202ENST00000354241 DCST1Q5T197 706 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 KRT80Q6KB66 452 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 PAPD4Q6PIY7 484 aaKnown RBP18.97■□□□□ 0.63
TRIM4-202ENST00000354241 UGT2A3Q6UWM9 527 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 CPEB2Q7Z5Q1 589 aaKnown RBP18.97■□□□□ 0.63
TRIM4-202ENST00000354241 DEFB124Q8NES8 71 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 B3GNT7Q8NFL0 401 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 C8orf44Q96CB5 159 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 MCHR1Q99705 422 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 ZPBPQ9BS86 351 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 WWTR1Q9GZV5 400 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 FAM118AQ9NWS6 357 aa18.97■□□□□ 0.63
TRIM4-202ENST00000354241 CCDC187A0A096LP49 1063 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 CDC14CA4D256 554 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 CDHR4A6H8M9 788 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 NR0B1P51843 470 aaKnown RBP18.96■□□□□ 0.63
TRIM4-202ENST00000354241 ISLR2Q6UXK2 745 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PRR22Q8IZ63 422 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 OFCC1Q8IZS5 231 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 GATA6Q92908 595 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 IRF2BPLQ9H1B7 796 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 RIBC2Q9H4K1 309 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 NTNG1Q9Y2I2 539 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PTRH2Q9Y3E5 179 aaKnown RBP18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PCNX2A6NKB5 2137 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PLD2O14939 933 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 SEC24DO94855 1032 aaPredicted RBP18.96■□□□□ 0.63
TRIM4-202ENST00000354241 GKN3PP0CG01 181 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 ANXA8P13928 327 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 MYF6P23409 242 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 GPR143P51810 404 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 CHN2P52757 468 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 ATP12AP54707 1039 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PSMD4P55036 377 aaKnown RBP18.96■□□□□ 0.63
TRIM4-202ENST00000354241 NCF4Q15080 339 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 ENTPD8Q5MY95 495 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 TMEM205Q6UW68 189 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 PLEKHM3Q6ZWE6 761 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 NFAM1Q8NET5 270 aaPredicted RBP18.96■□□□□ 0.63
TRIM4-202ENST00000354241 LPAR4Q99677 370 aa18.96■□□□□ 0.63
TRIM4-202ENST00000354241 MAGEA13PA6NCF6 341 aa18.95■□□□□ 0.62
TRIM4-202ENST00000354241 BCAS1O75363 584 aaPredicted RBP18.95■□□□□ 0.62
TRIM4-202ENST00000354241 CYC1P08574 325 aa18.95■□□□□ 0.62
TRIM4-202ENST00000354241 CYP4B1P13584 511 aa18.95■□□□□ 0.62
TRIM4-202ENST00000354241 CDH2P19022 906 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms