RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PXNP49023 591 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PRPS1P60891 318 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 CMIPQ8IY22 773 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM102Q8N9M5 508 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 HMGCLL1Q8TB92 370 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 BAHD1Q8TBE0 780 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 DKKL1Q9UK85 242 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 GSTT2BP0CG30 244 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PRKAR1BP31321 381 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ARRB2P32121 409 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 OC90Q02509 493 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PIGFQ07326 219 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 FIGNL1Q6PIW4 674 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 CARFQ8N187 725 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ARL14Q8N4G2 192 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF740Q8NDX6 193 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 OR6K6Q8NGW6 343 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 TSEN15Q8WW01 171 aaKnown RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 JSRP1Q96MG2 331 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 RNF6Q9Y252 685 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF443Q9Y2A4 671 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 GAPDHSO14556 408 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ECDO95905 644 aaPredicted RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PVRP15151 417 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 GGT2P36268 569 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 OMPP47874 163 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 HSD17B7P56937 341 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 RAB5BP61020 215 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 C6orf132Q5T0Z8 1188 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 PPP1R3BQ86XI6 285 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 RNF175Q8N4F7 328 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 MVB12AQ96EY5 273 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ARL5BQ96KC2 179 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 EIF3KQ9UBQ5 218 aaKnown RBP11.41□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF225Q9UK10 706 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 N6AMT1Q9Y5N5 214 aa11.41□□□□□ -0.58
SMAD9-201ENST00000350148 A0A0X1KG70 313 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 DNASE1L1P49184 302 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 HYAL2Q12891 473 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 FAM109BQ6ICB4 259 aaPredicted RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ULK3Q6PHR2 472 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 RPTNQ6XPR3 784 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 MISPQ8IVT2 679 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 FAM86B1Q8N7N1 296 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 AGBL5Q8NDL9 886 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 OR52R1Q8NGF1 315 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 EID2BQ96D98 161 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 POLDIP3Q9BY77 421 aaKnown RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 OR2B2Q9GZK3 357 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 B4GALT7Q9UBV7 327 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 SPTY2D1-AS1A0A0U1RR47 76 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 PAPLNO95428 1278 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 GCGRP47871 477 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 CSNK1EP49674 416 aaKnown RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 PPP3R1P63098 170 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ZXDBP98169 803 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 PITPNAQ00169 270 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ST3GAL4Q11206 333 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF829Q3KNS6 432 aaPredicted RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ALG10BQ5I7T1 473 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 SAXO2Q658L1 398 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 BORAQ6PGQ7 559 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 TEX10Q9NXF1 929 aaPredicted RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 AP3S2P59780 193 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 C5orf46Q6UWT4 87 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ADAD1Q96M93 576 aaKnown RBP11.4□□□□□ -0.58
SMAD9-201ENST00000350148 GLIPR2Q9H4G4 154 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 CXorf36Q9H7Y0 433 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 SLC23A2Q9UGH3 650 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 CBLCQ9ULV8 474 aa11.4□□□□□ -0.58
SMAD9-201ENST00000350148 ACOX3O15254 700 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 ORC5O43913 435 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 RELAQ04206 551 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 PMS2P3Q13401 168 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 LAPTM4AQ15012 233 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 RPS26P11Q5JNZ5 115 aaPredicted RBP11.4□□□□□ -0.59
SMAD9-201ENST00000350148 PAPD5Q8NDF8 572 aaKnown RBP11.4□□□□□ -0.59
SMAD9-201ENST00000350148 AP1S3Q96PC3 154 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 NAA11Q9BSU3 229 aaPredicted RBP11.4□□□□□ -0.59
SMAD9-201ENST00000350148 HPF1Q9NWY4 346 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.59
SMAD9-201ENST00000350148 ASB1Q9Y576 335 aa11.4□□□□□ -0.59
SMAD9-201ENST00000350148 WISP3O95389 354 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CD53P19397 219 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TCEA1P23193 301 aaKnown RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 FOLR3P41439 243 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SLC25A24Q6NUK1 477 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PIWIL3Q7Z3Z3 882 aaKnown RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TIGD4Q8IY51 512 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SMRP1Q8NCR6 262 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 OR9A4Q8NGU2 314 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 OR51Q1Q8NH59 317 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 RHBDD1Q8TEB9 315 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CDS1Q92903 461 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SLC29A1Q99808 456 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CRB3Q9BUF7 120 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms