RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 PRAP1Q96NZ9 151 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 IL26Q9NPH9 171 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 F6UZH7 168 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 RPL13AP40429 203 aaKnown RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 DYRK1AQ13627 763 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF689Q96CS4 500 aaPredicted RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 UHRF1Q96T88 793 aaPredicted RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 GAREM1Q9H706 876 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 CRHBPP24387 322 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 CLCNKAP51800 687 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 INHBCP55103 352 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 BTG1P62324 171 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 NPY6RQ99463 290 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 C12orf10Q9HB07 376 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 BACE2Q9Y5Z0 518 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 CPED1A4D0V7 1026 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 FABP6P51161 128 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 TRA2BP62995 288 aaKnown RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 PIM3Q86V86 326 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 ACOT11Q8WXI4 607 aaPredicted RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF442Q9H7R0 627 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 SLC35A3Q9Y2D2 325 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 A0A1W2PPL8 197 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 SLC43A1O75387 559 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 INHAP05111 366 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 CAV2P51636 162 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 APOFQ13790 326 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 SOHLH1Q5JUK2 328 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 VASH1Q7L8A9 365 aaPredicted RBP12.63□□□□□ -0.39
COL6A3-202ENST00000347401 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 TAC3Q9UHF0 121 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
COL6A3-202ENST00000347401 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PEX10O60683 326 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 UBL3O95164 117 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 CKMT1AP12532 417 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 IRF2P14316 349 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SLAMF7Q9NQ25 335 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 FCF1Q9Y324 198 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SPCS2Q15005 226 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 CASD1Q96PB1 797 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 TXNL4BQ9NX01 149 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 GPR25O00155 361 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ARHGAP33O14559 1287 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 MSS51Q4VC12 460 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SLC2A13Q96QE2 648 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SEMA4CQ9C0C4 833 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 BEX1Q9HBH7 125 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PCDHA9Q9Y5H5 950 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ITGB4P16144 1822 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 INTS1Q8N201 2190 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 TCRBV7S3A2A0A539 114 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 CLIC3O95833 236 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 TK1P04183 234 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 C1GALT1C1LP0DN25 315 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF136P52737 540 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ARHGAP19Q14CB8 494 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 TMEM156Q8N614 296 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 NDUFB2O95178 105 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 GPR50Q13585 617 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ACSS2Q9NR19 701 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SCML1Q9UN30 329 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 MEN1O00255 615 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 F10P00742 488 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ALDOBP05062 364 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 OR12D1P0DN82 309 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 CPOXP36551 454 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 MITD1Q8WV92 249 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PATZ1Q9HBE1 687 aaKnown RBP12.62□□□□□ -0.39
COL6A3-202ENST00000347401 POLHQ9Y253 713 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 ADH7P40394 386 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 BDH1Q02338 343 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 FBXL22Q6P050 247 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 NDUFAF7Q7L592 441 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 C14orf80Q86SX3 495 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 SEMA4GQ9NTN9 838 aa12.62□□□□□ -0.39
COL6A3-202ENST00000347401 PROS1P07225 676 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CNN3Q15417 329 aaKnown RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 SF3B4Q15427 424 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 SOWAHAQ2M3V2 549 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 EML3Q32P44 896 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms