RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CCRL2O00421 344 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 DIRAS1O95057 198 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 MFN2O95140 757 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 NSA2O95478 260 aaKnown RBP11.96□□□□□ -0.49
CLK3-201ENST00000345005 AGR2O95994 175 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 ATP1B1P05026 303 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 CTSBP07858 339 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 IFI6P09912 130 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 HNRNPCL4P0DMR1 293 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.49
CLK3-201ENST00000345005 RRM2P31350 389 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 DDOSTP39656 456 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 ARL4DP49703 201 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 MICAQ29983 383 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 RPS26P11Q5JNZ5 115 aaPredicted RBP11.96□□□□□ -0.49
CLK3-201ENST00000345005 RAB43Q86YS6 212 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 OR10G2Q8NGC3 310 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 OR6C4Q8NGE1 309 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 BBS10Q8TAM1 723 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 PIGKQ92643 395 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 C16orf58Q96GQ5 468 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 OR7D2Q96RA2 312 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 YIPF4Q9BSR8 244 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 DIABLOQ9NR28 239 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 CALML5Q9NZT1 146 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 SEC14L4Q9UDX3 406 aa11.96□□□□□ -0.49
CLK3-201ENST00000345005 MRPS33Q9Y291 106 aaKnown RBP11.96□□□□□ -0.49
CLK3-201ENST00000345005 DNAH14Q0VDD8 3507 aa11.96□□□□□ -0.5
CLK3-201ENST00000345005 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 A0A0A6YYC8 382 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 LOC100506127A0A0U1RQW1 187 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 PRAMEF27A3QJZ7 478 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 I3L1I5 382 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 YKT6O15498 198 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HRO43593 1189 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FGF17O60258 216 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 LDB3O75112 727 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ALX3O95076 343 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ADORA3P0DMS8 318 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 C21orf33P30042 268 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 AVPR1BP47901 424 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HSD11B2P80365 405 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 RHAGQ02094 409 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ST3GAL4Q11206 333 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 GRM7Q14831 915 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 DUSP7Q16829 419 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 AMZ1Q400G9 498 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 C6orf183Q5T699 404 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 MEDAGQ5VYS4 303 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 RNLSQ5VYX0 342 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 WDR74Q6RFH5 385 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 OR2L13Q8N349 312 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 Q8N9G6 341 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 TMEM52Q8NDY8 209 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 OR7G2Q8NG99 324 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 TP53INP1Q96A56 240 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ZC3H10Q96K80 434 aaKnown RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 FEVQ99581 238 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 EQTNQ9NQ60 294 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 SEMA5BQ9P283 1151 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FBXO4Q9UKT5 387 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 C19orf53Q9UNZ5 99 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 A0A087WV62 115 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HMX3A6NHT5 357 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FOXS1O43638 330 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 IFNW1P05000 195 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 PNLIPP16233 465 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 GABRB1P18505 474 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 CD1CP29017 333 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 EPHA2P29317 976 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HTR3AP46098 478 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 OR1E2P47887 323 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 KCNJ5P48544 419 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 MAN2A2P49641 1150 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 RORCP51449 518 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HMGA2P52926 109 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 IFITM2Q01629 132 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ID2Q02363 134 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 RUNX1T1Q06455 604 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 LAPTM4AQ15012 233 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 HLA-BQ31612 363 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 FAM214AQ32MH5 1076 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ZNF628Q5EBL2 1059 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 RABEPKQ7Z6M1 372 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ZNF595Q8IYB9 648 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms