RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 OR52N5Q8NH56 324 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 MZB1Q8WU39 189 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 DDB2Q92466 427 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 PLK3Q9H4B4 646 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 FKRPQ9H9S5 495 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 GALPQ9UBC7 116 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 DAPP1Q9UN19 280 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 SLC25A15Q9Y619 301 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 MDFIC2A0A1B0GVS7 189 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 A0A1W2PR80 420 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 PRAMEF25A6NGN4 478 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 OR6C76A6NM76 312 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 B3GALT2O43825 422 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 XPNPEP2O43895 674 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 FGF17O60258 216 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 ERLIN1O75477 346 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 PPM1BO75688 479 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 IGFBP1P08833 259 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-201ENST00000340660 GGT1P19440 569 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 CERS1P27544 350 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 PSMB4P28070 264 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 IGLV3-21P80748 117 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-201ENST00000340660 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 AFTPHQ6ULP2 937 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 SPATA19Q7Z5L4 167 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 IRF2BP2Q7Z5L9 587 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 GALNT10Q86SR1 603 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 P2RY8Q86VZ1 359 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 REXO1L1PQ8IX06 675 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 MRFAP1L1Q96HT8 127 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 C1QTNF6Q9BXI9 259 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 PIH1D1Q9NWS0 290 aaKnown RBP9.55□□□□□ -0.88
ATXN3-201ENST00000340660 SLC2A6Q9UGQ3 507 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-201ENST00000340660 TRAF6Q9Y4K3 522 aa9.55□□□□□ -0.88
ATXN3-201ENST00000340660 OR2M5A3KFT3 312 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 B9A039 149 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 SERPINA6P08185 405 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ANPEPP15144 967 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 NPPBP16860 134 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 HNRNPH1P31943 449 aaKnown RBP9.54□□□□□ -0.88
ATXN3-201ENST00000340660 HMGCS1Q01581 520 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 SLAMF1Q13291 335 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ZNF267Q14586 743 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ZNF470Q6ECI4 717 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 Q6ZT83 130 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 IGDCC3Q8IVU1 814 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 OR4L1Q8NH43 312 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 OR10D3Q8NH80 312 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ALS2CR12Q96Q35 445 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 SLC30A2Q9BRI3 323 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ANKZF1Q9H8Y5 726 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 MARCH4Q9P2E8 410 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-201ENST00000340660 PRSS50Q9UI38 385 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ICAM5Q9UMF0 924 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
ATXN3-201ENST00000340660 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 ERI3O43414 337 aaKnown RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 NIPSNAP2O75323 286 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 SLC35E2P0CK97 266 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 MYBL1P10243 752 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 IGHV1-2P23083 117 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 EDNRAP25101 427 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 EEF1GP26641 437 aaKnown RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 DSCR4P56555 118 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 NRG3P56975 720 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 KRTAP10-11P60412 298 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 EFNB3Q15768 340 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 ARMCX4Q5H9R4 360 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 LCE5AQ5TCM9 118 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 MBOAT1Q6ZNC8 495 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 NUP54Q7Z3B4 507 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 RFX6Q8HWS3 928 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 TRPV3Q8NET8 790 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 OR52B6Q8NGF0 335 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 FAM110BQ8TC76 370 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 MS4A6EQ96DS6 147 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 KTI12Q96EK9 354 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 TSPY26PQ9H489 355 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 ZNF665Q9H7R5 613 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 C10orf88Q9H8K7 445 aa9.53□□□□□ -0.88
ATXN3-201ENST00000340660 MCTS1Q9ULC4 181 aaKnown RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 AAR2Q9Y312 384 aaKnown RBP9.53□□□□□ -0.88
ATXN3-201ENST00000340660 UGT2B11O75310 529 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 GZMAP12544 262 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 KRT15P19012 456 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 HK1P19367 917 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 COX5AP20674 150 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 RPS3P23396 243 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 GATA3P23771 443 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms