RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TRMT12Q53H54 448 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 EXOSC6Q5RKV6 272 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 GTF2IRD2BQ6EKJ0 949 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PGBD2Q6P3X8 592 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CD300LDQ6UXZ3 194 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 FRRS1Q6ZNA5 592 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 GTF2IRD2Q86UP8 949 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF619Q8N2I2 560 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 C7orf57Q8NEG2 295 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF501Q96CX3 271 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 Q96MT0 163 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF578Q96N58 590 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PELOQ9BRX2 385 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 FUZQ9BT04 418 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 SPRTNQ9H040 489 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ANKRA2Q9H9E1 313 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ENAMQ9NRM1 1142 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PAK1IP1Q9NWT1 392 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CLN6Q9NWW5 311 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ERVK-18Q9QC07 812 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 WARS2Q9UGM6 360 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF443Q9Y2A4 671 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 H0YIG0 161 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CTNSO60931 367 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CSO75390 466 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PCMT1P22061 227 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CHMP24386 653 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 STX4Q12846 297 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 TARDBPQ13148 414 aaKnown RBP eCLIP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 GRM7Q14831 915 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 DCST2Q5T1A1 773 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PRAMEF17Q5VTA0 474 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 TYW3Q6IPR3 259 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PODNL1Q6PEZ8 512 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 RRM2BQ7LG56 351 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 RANBP3LQ86VV4 465 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 VRK2Q86Y07 508 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 VWA5B2Q8N398 1253 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 TMEM52Q8NDY8 209 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 OR1L3Q8NH93 324 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 SLC7A13Q8TCU3 470 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 APH1BQ8WW43 257 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 TRUB1Q8WWH5 349 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 PMEPA1Q969W9 287 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ANKRD9Q96BM1 317 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 SDF2Q99470 211 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF350Q9GZX5 532 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 APMAPQ9HDC9 416 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 KRCC1Q9NPI7 259 aaPredicted RBP14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 CDC14AQ9UNH5 594 aa14.12□□□□□ -0.15
TUBB4B-201ENST00000340384 A0A0A6YYC8 382 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 H3BMQ9 156 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 I3L1I5 382 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SEMA7AO75326 666 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 EPPINO95925 133 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 GUSBP08236 651 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 CDK4P11802 303 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 CCNA2P20248 432 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 GCGRP47871 477 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 GSSP48637 474 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 ARL4DP49703 201 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 POU6F2P78424 691 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 EMX1Q04741 257 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF155Q12901 538 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SLC13A2Q13183 592 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SEC23BQ15437 767 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SLX4IPQ5VYV7 408 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 CASP12Q6UXS9 341 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 PTCHD4Q6ZW05 846 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 GALNT12Q8IXK2 581 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SHISA5Q8N114 240 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 OR4K5Q8NGD3 323 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 GNPDA2Q8TDQ7 276 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 ADAMTS14Q8WXS8 1223 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 CTHRC1Q96CG8 243 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 FAM122AQ96E09 287 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 COG8Q96MW5 612 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 COPS4Q9BT78 406 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 RSPO3Q9BXY4 272 aaPredicted RBP14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 SAP130Q9H0E3 1048 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 PRTFDC1Q9NRG1 225 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 FGF21Q9NSA1 209 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 PSORS1C1Q9UIG5 152 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 PCDHGA10Q9Y5H3 936 aa14.11□□□□□ -0.15
TUBB4B-201ENST00000340384 FITM1A5D6W6 292 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 EFCAB10A6NFE3 127 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 FAM227AF5H4B4 570 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 H3BN98 237 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 CYP7B1O75881 506 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 OR5F1O95221 314 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 TIAF1O95411 115 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 MT-ND2P03891 347 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 POU1F1P28069 291 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 ETV5P41161 510 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 ST13P50502 369 aaKnown RBP14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 PIGFQ07326 219 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 ZSWIM7Q19AV6 140 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 KIF26BQ2KJY2 2108 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms