RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 AP3D1O14617 1153 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 TNFRSF10CO14798 259 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 RASGRP1O95267 797 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 THEGLP0DJG4 465 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 CPEP16870 476 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 IFNGR2P38484 337 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 TSFMP43897 325 aaKnown RBP15.21■□□□□ 0.03
LITAF-201ENST00000339430 MTNR1AP48039 350 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 RUNX1T1Q06455 604 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 RGS1Q08116 209 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 HNRNPA0Q13151 305 aaKnown RBP15.21■□□□□ 0.03
LITAF-201ENST00000339430 CEBPEQ15744 281 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 PRAMEF8Q5VWM4 474 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 PRAMEF7Q5VXH5 474 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 FBXO42Q6P3S6 717 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 NRMQ8IXM6 262 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 LRRC25Q8N386 305 aaPredicted RBP15.21■□□□□ 0.03
LITAF-201ENST00000339430 SYT14Q8NB59 555 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 OR4Q3Q8NH05 313 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 OR10G6Q8NH81 332 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 PIGXQ8TBF5 258 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 TMEM255BQ8WV15 326 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 GAL3ST3Q96A11 431 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 C1GALT1C1Q96EU7 318 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 SLC38A2Q96QD8 506 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 TMEM168Q9H0V1 697 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 KLHL28Q9NXS3 571 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 LIPT1Q9Y234 373 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 A0A0C4DFX4 3053 aa15.21■□□□□ 0.03
LITAF-201ENST00000339430 ASNA1O43681 348 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 NUDT1P36639 197 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 ACTR1BP42025 376 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 MAGEA8P43361 318 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 ACTR1AP61163 376 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
LITAF-201ENST00000339430 PSPHP78330 225 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 FAM214AQ32MH5 1076 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 PRRT3Q5FWE3 981 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TYW3Q6IPR3 259 aaKnown RBP15.2■□□□□ 0.02
LITAF-201ENST00000339430 MFSD12Q6NUT3 480 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TMPRSS11AQ6ZMR5 421 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 FRRS1Q6ZNA5 592 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 AKAP14Q86UN6 197 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 LAPTM4BQ86VI4 370 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 ABCA7Q8IZY2 2146 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 EDAQ92838 391 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 CALML5Q9NZT1 146 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TBC1D24Q9ULP9 559 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 V9GYH0 126 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 KNL1Q8NG31 2342 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 NCOR1O75376 2440 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 CTSVO60911 334 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 APOA1P02647 267 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 SLC35G6P0C7Q6 338 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 MSL3P1P0C860 447 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 CD27P26842 260 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 SOX18P35713 384 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TNFRSF17Q02223 184 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 RAB40BQ12829 278 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
LITAF-201ENST00000339430 GPR68Q15743 365 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 ZNF542PQ5EBM4 170 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 C3orf38Q5JPI3 329 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 RASSF6Q6ZTQ3 369 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 NCCRP1Q6ZVX7 275 aaPredicted RBP15.2■□□□□ 0.02
LITAF-201ENST00000339430 GDF7Q7Z4P5 450 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 CADM4Q8NFZ8 388 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 OR4F15Q8NGB8 312 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TXNDC15Q96J42 360 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 TIGARQ9NQ88 270 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 KLF15Q9UIH9 416 aa15.2■□□□□ 0.02
LITAF-201ENST00000339430 ZNF443Q9Y2A4 671 aaPredicted RBP15.2■□□□□ 0.02
LITAF-201ENST00000339430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 GSAPA4D1B5 854 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 SNX4O95219 450 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 SLC2A10O95528 541 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 POLR2CP19387 275 aaPredicted RBP15.19■□□□□ 0.02
LITAF-201ENST00000339430 BCKDHBP21953 392 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 SDC2P34741 201 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 ARFIP1P53367 373 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 CDH11P55287 796 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 CAV3P56539 151 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 DBPQ10586 325 aaPredicted RBP15.19■□□□□ 0.02
LITAF-201ENST00000339430 RUNX2Q13950 521 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 ZNF79Q15937 498 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 BAK1Q16611 211 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 DUSP5Q16690 384 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 MINDY4Q4G0A6 757 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 UTS2BQ765I0 119 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 GALNT12Q8IXK2 581 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 KLHDC7BQ96G42 594 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 SLC41A3Q96GZ6 507 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 HSPA12BQ96MM6 686 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 MS4A4EQ96PG1 132 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 CCDC32Q9BV29 185 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 ABCB9Q9NP78 766 aa15.19■□□□□ 0.02
LITAF-201ENST00000339430 CMAHPQ9Y471 501 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms