RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PLEKHA6Q9Y2H5 1048 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
C9orf47-201ENST00000334490 TRBV2A0A0J9YWF9 115 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 ANKRD28O15084 1053 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 CCNKO75909 580 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 MTNR1AP48039 350 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 KCNJ10P78508 379 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 GPR19Q15760 415 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 MICAQ29983 383 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 ZDHHC5Q9C0B5 715 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 GLS2Q9UI32 602 aa14.1□□□□□ -0.15
C9orf47-201ENST00000334490 MCTS1Q9ULC4 181 aaKnown RBP14.1□□□□□ -0.15
C9orf47-201ENST00000334490 SORBS2O94875 1100 aaKnown RBP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 MT-ND2P03891 347 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 BMP1P13497 986 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 HOXC8P31273 242 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 MAP2K4P45985 399 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TUBA1BP68363 451 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TUBA1AQ71U36 451 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 FRS2Q8WU20 508 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SLAMF8Q9P0V8 285 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 NXT1Q9UKK6 140 aaKnown RBP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 DHDHQ9UQ10 334 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TAPBPO15533 448 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 APOC1P02654 83 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TCN2P20062 427 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 BCL6P41182 706 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 PRKXP51817 358 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 MALLQ13021 153 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 APOFQ13790 326 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SF3B4Q15427 424 aaKnown RBP eCLIP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SPHARQ15513 63 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 OR7A5Q15622 319 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 HSD17B12Q53GQ0 312 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 KLBQ86Z14 1044 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 LIX1LQ8IVB5 337 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 FRMD1Q8N878 549 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 MGLLQ99685 303 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SLAMF7Q9NQ25 335 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 ACVR1Q04771 509 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 CNPY1Q3B7I2 92 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SCGB2B2Q4G0G5 96 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 GARNL3Q5VVW2 1013 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TMEM236Q5W0B7 351 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 AKAP14Q86UN6 197 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 VRK2Q86Y07 508 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TOMM5Q8N4H5 51 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 NEIL3Q8TAT5 605 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 CCDC74AQ96AQ1 378 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 S100A16Q96FQ6 103 aaKnown RBP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 COQ10AQ96MF6 247 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 EIF3KQ9UBQ5 218 aaKnown RBP14.09□□□□□ -0.15
C9orf47-201ENST00000334490 SH3BGRL2Q9UJC5 107 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 COL4A5P29400 1685 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 TTC3P53804 2025 aa14.09□□□□□ -0.15
C9orf47-201ENST00000334490 YY2O15391 372 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 T-ENOLP0DO92 83 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 CD46P15529 392 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 SEC23BQ15437 767 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 ABHD17CQ6PCB6 329 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 ULK3Q6PHR2 472 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 TMEM207Q6UWW9 146 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 HS3ST5Q8IZT8 346 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 CCL4L1Q8NHW4 92 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 PIGUQ9H490 435 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 VNN3Q9NY84 501 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 MCM3APO60318 1980 aa14.08□□□□□ -0.15
C9orf47-201ENST00000334490 FAM171A2A8MVW0 826 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CTSLP07711 333 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 POU3F2P20265 443 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-201ENST00000334490 E2F1Q01094 437 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CGB2Q6NT52 195 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CEACAM19Q7Z692 300 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 FTMTQ8N4E7 242 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 HPS1Q92902 700 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 FRMD6Q96NE9 622 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ARMC1Q9NVT9 282 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CARD8Q9Y2G2 431 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF749O43361 778 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 TUBA3CQ13748 450 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF367Q7RTV3 350 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 TSPYL5Q86VY4 417 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-201ENST00000334490 RCBTB1Q8NDN9 531 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ADAMTS16Q8TE57 1224 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 GALR3O60755 368 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-201ENST00000334490 PRKRAO75569 313 aaKnown RBP14.08□□□□□ -0.16
C9orf47-201ENST00000334490 B3GALT4O96024 378 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 PLATP00750 562 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 IGHEP01854 428 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 PSKH1P11801 424 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 GNG2P59768 71 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ACTA2P62736 377 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ACTG2P63267 376 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CHRNEQ04844 493 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 FCRLBQ6BAA4 426 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 KIAA1211LQ6NV74 962 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 SYT14Q8NB59 555 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 OR2T11Q8NH01 316 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ZFPM2Q8WW38 1151 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms