RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CDH11P55287 796 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
TPM3-206ENST00000330188 DCST2Q5T1A1 773 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 LSRQ86X29 649 aaPredicted RBP13.56□□□□□ -0.24
TPM3-206ENST00000330188 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 RBM12BQ8IXT5 1001 aaKnown RBP13.56□□□□□ -0.24
TPM3-206ENST00000330188 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 ZNF619Q8N2I2 560 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 GPBAR1Q8TDU6 330 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 GATAD2BQ8WXI9 593 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 TMEM203Q969S6 136 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 NLGN3Q9NZ94 848 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 TRAPPC4Q9Y296 219 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 YARS2Q9Y2Z4 477 aaKnown RBP13.56□□□□□ -0.24
TPM3-206ENST00000330188 ENTPD2Q9Y5L3 495 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 HS3ST3A1Q9Y663 406 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 A0A087WV62 115 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 A0A0J9YY10 115 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 C10orf142B7Z368 130 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CYR61O00622 381 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 PLOD3O60568 738 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 TNFP01375 233 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 IL1AP01583 271 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 PRG2P13727 222 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 NT5EP21589 574 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CD79BP40259 229 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 TGM4P49221 684 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 RPS25P62851 125 aaKnown RBP13.55□□□□□ -0.24
TPM3-206ENST00000330188 SHC2P98077 582 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 TPBGQ13641 420 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 PLK5Q496M5 336 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 EOGTQ5NDL2 527 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 C22orf42Q6IC83 251 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 ABI3BPQ7Z7G0 1075 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CLDN22Q8N7P3 220 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 ZNF485Q8NCK3 441 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 GPR151Q8TDV0 419 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 WDFY2Q96P53 400 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 DUSP22Q9NRW4 184 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 MED17Q9NVC6 651 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 FBXO34Q9NWN3 711 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 KCNE5Q9UJ90 142 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CDH10Q9Y6N8 788 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 IQCMA0A1B0GVH7 501 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 FAM221BA6H8Z2 402 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 RGS5O15539 181 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 LRRTM2O43300 516 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 STX11O75558 287 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 SEMA4FO95754 770 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 GPR75O95800 540 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CELA2BP08218 269 aaPredicted RBP13.55□□□□□ -0.24
TPM3-206ENST00000330188 MSL3P1P0C860 447 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 HTR2AP28223 471 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 PSPHP78330 225 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 MXD1Q05195 221 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 TMEM44Q2T9K0 475 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
TPM3-206ENST00000330188 RANBP3LQ86VV4 465 aaPredicted RBP13.55□□□□□ -0.24
TPM3-206ENST00000330188 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CA13Q8N1Q1 262 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CDRT4Q8N9R6 151 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 HPS1Q92902 700 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 RFKQ969G6 155 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 SLC25A46Q96AG3 418 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 ARHGAP9Q9BRR9 750 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 TEX12Q9BXU0 123 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 HRASLS2Q9NWW9 162 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 CLDND1Q9NY35 253 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 MAT2BQ9NZL9 334 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 IL20RAQ9UHF4 553 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 V9GYH0 126 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
TPM3-206ENST00000330188 NPIPA5A0A0B4J1W7 369 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 TRAPPC13A5PLN9 417 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 NPIPA7E9PJI5 369 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 PEX12O00623 359 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 GALR3O60755 368 aaPredicted RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 SLC2A10O95528 541 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 DBIP07108 87 aaKnown RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 CT62P0C5K7 136 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 CLEC2LP0C7M8 214 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 GKN3PP0CG01 181 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 NPIPA8P0DM63 369 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 IMPDH2P12268 514 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 NID1P14543 1247 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 SLC1A3P43003 542 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 RABIFP47224 123 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 MGAT2Q10469 447 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 DESI1Q6ICB0 168 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 WDR88Q6ZMY6 472 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 ZNF655Q8N720 491 aaPredicted RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 COX18Q8N8Q8 333 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms