RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 COL21A1Q96P44 957 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 TREX2Q9BQ50 279 aaPredicted RBP20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 WDR45Q9Y484 360 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 AP4S1Q9Y587 144 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 CPAMD8Q8IZJ3 1885 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 TMEM247A6NEH6 219 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 ICOSLGO75144 302 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 SOX30O94993 753 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 PGM3O95394 542 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 AK1P00568 194 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 UMPSP11172 480 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 ATP6V1C1P21283 382 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 CRISP3P54108 245 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 HPCAP84074 193 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 RBBP4Q09028 425 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 FLYWCH1Q4VC44 716 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 REEP3Q6NUK4 255 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 OPN5Q6U736 354 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 LRRC74BQ6ZQY2 392 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 OR4C3Q8NH37 302 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 KCNE5Q9UJ90 142 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 ANAPC2Q9UJX6 822 aa20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 DSPP15924 2871 aaKnown RBP20.6■□□□□ 0.89
CCDC85B-201ENST00000312579 UTS2O95399 124 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 CD96P40200 585 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 OC90Q02509 493 aaPredicted RBP20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 MFAP5Q13361 173 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 TUBA3CQ13748 450 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 GRAMD1BQ3KR37 738 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 TUBA3EQ6PEY2 450 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 ADGRG5Q8IZF4 528 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 CANT1Q8WVQ1 401 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 HGDQ93099 445 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 NODALQ96S42 347 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 G6PC3Q9BUM1 346 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 HPF1Q9NWY4 346 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 MRTO4Q9UKD2 239 aaKnown RBP20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 AURKCQ9UQB9 309 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 ANGPT4Q9Y264 503 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 EXPH5Q8NEV8 1989 aa20.59■□□□□ 0.89
CCDC85B-201ENST00000312579 OR6C70A6NIJ9 312 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 K7EM74 188 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 ABCB7O75027 752 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 PNLIPRP2P54317 469 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 VEZF1Q14119 521 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 MAPK14Q16539 360 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 NTRK2Q16620 822 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 BICRALQ6AI39 1079 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 MDGA2Q7Z553 956 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 ZNF227Q86WZ6 799 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 ZNF619Q8N2I2 560 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 PQLC1Q8N2U9 271 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 OR52E4Q8NGH9 312 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 SLCO4A1Q96BD0 722 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 SIGLEC12Q96PQ1 595 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 RSPO3Q9BXY4 272 aaPredicted RBP20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 CCM2LQ9NUG4 571 aaPredicted RBP20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 CSAG2Q9Y5P2 127 aa20.58■□□□□ 0.89
CCDC85B-201ENST00000312579 MAP1BP46821 2468 aaKnown RBP20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 KIAA0513O60268 411 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 OPN1SWP03999 348 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 PDGFAP04085 211 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 HLCSP50747 726 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 PSMD4P55036 377 aaKnown RBP20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 TBCELQ5QJ74 424 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 SPINK14Q6IE38 97 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 CYP4Z2PQ8N1L4 340 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 UTP23Q9BRU9 249 aaKnown RBP20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 SAP130Q9H0E3 1048 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 PRORYQ9H606 182 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 C6orf203Q9P0P8 240 aaPredicted RBP20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 ABI3Q9P2A4 366 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 V9GYQ6 96 aa20.58■□□□□ 0.88
CCDC85B-201ENST00000312579 TNRC6AQ8NDV7 1962 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 A0A0G2JPF8 293 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 C17orf51A8MQB3 221 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 HNRNPCL2B2RXH8 293 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 HNRNPCL3B7ZW38 293 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 UGT2B17O75795 530 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 HNRNPCL4P0DMR1 293 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 NAGAP17050 411 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 DCTP40126 519 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 PTDSS1P48651 473 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 CYB561P49447 251 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 TMED10P49755 219 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 CRYBA2P53672 197 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 PCBP3P57721 371 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 PSPHP78330 225 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 GNA13Q14344 377 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 APOOLQ6UXV4 268 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 NUP54Q7Z3B4 507 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 CATSPER1Q8NEC5 780 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 BBS10Q8TAM1 723 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 POP5Q969H6 163 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 SMAD5Q99717 465 aaKnown RBP20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 RTN4RQ9BZR6 473 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 BCL2L10Q9HD36 194 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 ARMC1Q9NVT9 282 aa20.57■□□□□ 0.88
CCDC85B-201ENST00000312579 CALML5Q9NZT1 146 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms