RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PCDHGA8Q9Y5G5 932 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 SH3D21A4FU49 640 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 CPSF4LA6NMK7 179 aaKnown RBP4.6□□□□□ -1.67
CAST-201ENST00000309190 FAM166BA8MTA8 275 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 BCAS1O75363 584 aaPredicted RBP4.6□□□□□ -1.67
CAST-201ENST00000309190 STSP08842 583 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 ITGAMP11215 1152 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 ATP6V1B1P15313 513 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 FUT1P19526 365 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 AGXTP21549 392 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 PIK3CBP42338 1070 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 PTPN5P54829 565 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 LIM2P55344 173 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 PMP22Q01453 160 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 RPA4Q13156 261 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 FADDQ13158 208 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 KIR2DS3Q14952 304 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 ENPP6Q6UWR7 440 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 TIPARPQ7Z3E1 657 aaKnown RBP4.6□□□□□ -1.67
CAST-201ENST00000309190 ZAR1Q86SH2 424 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 NUP43Q8NFH3 380 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 OR51L1Q8NGJ5 315 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 DIO2Q92813 273 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 NAT6Q93015 286 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 TM4SF18Q96CE8 201 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 TXNDC15Q96J42 360 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 SERPINI1Q99574 410 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 TRMOQ9BU70 441 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 FAIM2Q9BWQ8 316 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 DEFB126Q9BYW3 111 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 HOXD1Q9GZZ0 328 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 GLIPR2Q9H4G4 154 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 FOLH1BQ9HBA9 442 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 TMEM184CQ9NVA4 438 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 QPCTLQ9NXS2 382 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 VNN3Q9NY84 501 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 SEC14L3Q9UDX4 400 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 CLEC4AQ9UMR7 237 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 CSAG2Q9Y5P2 127 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 AUP1Q9Y679 476 aa4.6□□□□□ -1.67
CAST-201ENST00000309190 HEATR1Q9H583 2144 aaKnown RBP4.6□□□□□ -1.67
CAST-201ENST00000309190 A0A087WXM4 84 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TRBV11-1A0A0K0K1C0 115 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CENPVL1A0A0U1RR11 272 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 A0A1W2PP18 115 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 SERTM1A2A2V5 107 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 FAM171A2A8MVW0 826 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 PLGP00747 810 aaPredicted RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 SERPINA1P01009 418 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 PDGFAP04085 211 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 GGT1P19440 569 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CHMP24386 653 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TTKP33981 857 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 MPIP34949 423 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 NAA20P61599 178 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 UBE2IP63279 158 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 TGM3Q08188 693 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 C3AR1Q16581 482 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 ISXQ2M1V0 245 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 SAMD4BQ5PRF9 694 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 SLC35F1Q5T1Q4 408 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 SPINK14Q6IE38 97 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 GRHL2Q6ISB3 625 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TMEM71Q6P5X7 295 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 C16orf54Q6UWD8 224 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 KCTD8Q6ZWB6 473 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 WDR5BQ86VZ2 330 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TNIP2Q8NFZ5 429 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CYGBQ8WWM9 190 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 HDAC2Q92769 488 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 SLC25A23Q9BV35 468 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CCDC90BQ9GZT6 254 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 RASSF1Q9NS23 344 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 KLRF1Q9NZS2 232 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 PCOLCE2Q9UKZ9 415 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 MAPRE3Q9UPY8 281 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TMED5Q9Y3A6 229 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 ITPR3Q14573 2671 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 URADA6NGE7 173 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CCDC160A6NGH7 325 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 DSCR3O14972 297 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 HCRTR2O43614 444 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 CPNE3O75131 537 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 TBX6O95947 436 aaPredicted RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 FAM157BP0CG42 384 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 RNH1P13489 461 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 ELK4P28324 431 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 GSK3BP49841 420 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 ALDH3A2P51648 485 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 C21orf58P58505 322 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 RPS15P62841 145 aaKnown RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 INSM1Q01101 510 aaPredicted RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 MAP4K2Q12851 820 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 Q6ZPB1 254 aaPredicted RBP4.59□□□□□ -1.67
CAST-201ENST00000309190 VRK2Q86Y07 508 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 TCAIMQ8N3R3 496 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 OR7G2Q8NG99 324 aa4.59□□□□□ -1.67
CAST-201ENST00000309190 ZNF563Q8TA94 476 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms