RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MTRF1O75570 445 aaKnown RBP12.24□□□□□ -0.45
TRIM35-201ENST00000305364 LIMS3P0CW19 117 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 LIMS4P0CW20 117 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GJA1P17302 382 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 TRIM23P36406 574 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 OMPP47874 163 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ARHGDIBP52566 201 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 LIX1LQ8IVB5 337 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 CPA6Q8N4T0 437 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 BOLLQ8N9W6 283 aaKnown RBP12.24□□□□□ -0.45
TRIM35-201ENST00000305364 FCAMRQ8WWV6 532 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SORCS1Q8WY21 1168 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 KLK6Q92876 244 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 NLGN3Q9NZ94 848 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 A0A0G2JPF8 293 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 TRABD2BA6NFA1 517 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 HNRNPCL3B7ZW38 293 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ADAM12O43184 909 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 LANCL1O43813 399 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 HNRNPCL4P0DMR1 293 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 CTRB1P17538 263 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 NFYAP23511 347 aaPredicted RBP12.24□□□□□ -0.45
TRIM35-201ENST00000305364 EDNRAP25101 427 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 COL9A2Q14055 689 aaPredicted RBP12.24□□□□□ -0.45
TRIM35-201ENST00000305364 FCRLBQ6BAA4 426 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GPR139Q6DWJ6 353 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 LHFPL5Q8TAF8 219 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SUN3Q8TAQ9 357 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GLYATL1Q969I3 302 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GAL3ST1Q99999 423 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SLC35C2Q9NQQ7 365 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ASB6Q9NWX5 421 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ZSCAN32Q9NX65 697 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 FLVCR2Q9UPI3 526 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF780BQ9Y6R6 833 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 KLHL18O94889 574 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 ADH1AP07327 375 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GDNFP39905 211 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 HES5Q5TA89 166 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM81Q6P7N7 255 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SLC44A3Q8N4M1 653 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 CYB561A3Q8NBI2 242 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 GPR32P1Q8NGA4 272 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 FBXW5Q969U6 566 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SEC22CQ9BRL7 303 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 SLC39A1Q9NY26 324 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 TAAR2Q9P1P5 351 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 CHST2Q9Y4C5 530 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 H3BSH0 61 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 IFNGP01579 166 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 C1SP09871 688 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 TAS2R43P59537 309 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ERVK-25P63136 954 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 DSC1Q08554 894 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 RSPO2Q6UXX9 243 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 HSD11B1LQ7Z5J1 315 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 GLRX5Q86SX6 157 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 PLA2G15Q8NCC3 412 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 NEURL3Q96EH8 262 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 SYNDIG1Q9H7V2 258 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 MBD1Q9UIS9 605 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 EP400Q96L91 3159 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ARID1BQ8NFD5 2236 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 CACNA1CQ13936 2221 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 A0A1W2PRQ8 180 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 POP7O75817 140 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 RPN2P04844 631 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 RRASP10301 218 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 HTR4Q13639 388 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF322Q6U7Q0 402 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 PRICKLE2Q7Z3G6 844 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 CALML5Q9NZT1 146 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 PDCD11Q14690 1871 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 A0A087WUU8 490 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 DISC1C4P0D8 188 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 KRT33AO76009 404 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 SIX6O95475 246 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF806P0C7X5 589 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 LSM11P83369 360 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 TSPAN31Q12999 210 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 DUSP6Q16828 381 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 CLVS2Q5SYC1 327 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 HAGHLQ6PII5 290 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 BBS1Q8NFJ9 593 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 S100A16Q96FQ6 103 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 GPR137Q96N19 417 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms