RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PDGFAP04085 211 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 GGT1P19440 569 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 RNF144AP50876 292 aaPredicted RBP24.91■■□□□ 1.58
HDAC3-201ENST00000305264 MAPK14Q16539 360 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 BICRALQ6AI39 1079 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 SPINK14Q6IE38 97 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 NUP54Q7Z3B4 507 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 GPALPP1Q8IXQ4 340 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 SH2D2AQ9NP31 389 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 CSAG2Q9Y5P2 127 aa24.91■■□□□ 1.58
HDAC3-201ENST00000305264 PIEZO2Q9H5I5 2752 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 OR5H15A6NDH6 313 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 K7EM74 188 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 CXCR6O00574 342 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 GSTA4O15217 222 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 UGT2B17O75795 530 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 NEURL1O76050 574 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 OXSR1O95747 527 aaPredicted RBP24.9■■□□□ 1.58
HDAC3-201ENST00000305264 CCL3P10147 92 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 CRYBA2P53672 197 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 ARG2P78540 354 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 OR1C1Q15619 314 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 LINC00303Q3SY05 128 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 RTL4Q6ZR62 310 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 PTRH1Q86Y79 214 aaKnown RBP24.9■■□□□ 1.58
HDAC3-201ENST00000305264 TNIP2Q8NFZ5 429 aa24.9■■□□□ 1.58
HDAC3-201ENST00000305264 UTP4Q969X6 686 aaKnown RBP24.9■■□□□ 1.58
HDAC3-201ENST00000305264 LCN1P31025 176 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 EVI2BP34910 448 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 CD97P48960 835 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 KCNJ2P63252 427 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 INTS11Q5TA45 600 aaKnown RBP24.89■■□□□ 1.58
HDAC3-201ENST00000305264 GRHL3Q8TE85 626 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 TTC9Q92623 222 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 HAS2Q92819 552 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 TMCO6Q96DC7 493 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 ABHD17AQ96GS6 310 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 MTHFD2LQ9H903 347 aaPredicted RBP24.89■■□□□ 1.58
HDAC3-201ENST00000305264 UBQLN4Q9NRR5 601 aa24.89■■□□□ 1.58
HDAC3-201ENST00000305264 SUCOQ9UBS9 1254 aaKnown RBP24.89■■□□□ 1.58
HDAC3-201ENST00000305264 GPC6Q9Y625 555 aaPredicted RBP24.89■■□□□ 1.58
HDAC3-201ENST00000305264 TP53I11O14683 189 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 OPN1SWP03999 348 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 FAM87AP0C7U9 286 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 RPS4Y1P22090 263 aaKnown RBP24.89■■□□□ 1.57
HDAC3-201ENST00000305264 ATP12AP54707 1039 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 COL28A1Q2UY09 1125 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 PDZK1Q5T2W1 519 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 APOOLQ6UXV4 268 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 SPPL2AQ8TCT8 520 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 PAQR8Q8TEZ7 354 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 SGCZQ96LD1 299 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 SLC7A8Q9UHI5 535 aa24.89■■□□□ 1.57
HDAC3-201ENST00000305264 AGAP5A6NIR3 686 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 ARPC2O15144 300 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 ETS2P15036 469 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 TBXA2RP21731 343 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 MS4A2Q01362 244 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 BNIP2Q12982 314 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 ST3GAL2Q16842 350 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 PRAMEF20Q5VT98 475 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 CCDC80Q76M96 950 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 ZNF614Q8N883 585 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 GOLM1Q8NBJ4 401 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 RSPO3Q9BXY4 272 aaPredicted RBP24.88■■□□□ 1.57
HDAC3-201ENST00000305264 RTN4RQ9BZR6 473 aa24.88■■□□□ 1.57
HDAC3-201ENST00000305264 FADS1O60427 444 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 ZNF141Q15928 474 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 LRRC23Q53EV4 343 aaPredicted RBP24.87■■□□□ 1.57
HDAC3-201ENST00000305264 POGLUT1Q8NBL1 392 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 PSD4Q8NDX1 1056 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 MDS2Q8NDY4 140 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 RNF138Q8WVD3 245 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 TAMM41Q96BW9 452 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 MMADHCQ9H3L0 296 aaPredicted RBP24.87■■□□□ 1.57
HDAC3-201ENST00000305264 CNOT11Q9UKZ1 510 aaKnown RBP24.87■■□□□ 1.57
HDAC3-201ENST00000305264 SNX13Q9Y5W8 968 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 NBEAQ8NFP9 2946 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 SLC25A12O75746 678 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 NGFRP08138 427 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 TRIM25Q14258 630 aaKnown RBP24.87■■□□□ 1.57
HDAC3-201ENST00000305264 GLYATQ6IB77 296 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 PATL1Q86TB9 770 aaKnown RBP24.87■■□□□ 1.57
HDAC3-201ENST00000305264 VRK2Q86Y07 508 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 KRT73Q86Y46 540 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 CATSPER1Q8NEC5 780 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 ZNF607Q96SK3 696 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 HES7Q9BYE0 225 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 HOXD1Q9GZZ0 328 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 GALNT9Q9HCQ5 603 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 MAGEL2Q9UJ55 1249 aa24.87■■□□□ 1.57
HDAC3-201ENST00000305264 BSNQ9UPA5 3926 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 PRAMEF25A6NGN4 478 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 CLDN24A6NM45 220 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 M0QX08 132 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 CDK2AP1O14519 115 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 ADAM10O14672 748 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 SCO2O43819 266 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 KDELR2P33947 212 aa24.86■■□□□ 1.57
HDAC3-201ENST00000305264 DMTNQ08495 405 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms