RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PDZK1Q5T2W1 519 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 NLGN4XQ8N0W4 816 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 OR4N2Q8NGD1 307 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 VSTM2LQ96N03 204 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 MKKSQ9NPJ1 570 aaPredicted RBP13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 LANCL2Q9NS86 450 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 SEMA4GQ9NTN9 838 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 WARS2Q9UGM6 360 aaKnown RBP13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 CBLCQ9ULV8 474 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 GSTM3P21266 225 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 COX10Q12887 443 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 SMN1Q16637 294 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ZBED5Q49AG3 693 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF770Q6IQ21 691 aaPredicted RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 QSOX2Q6ZRP7 698 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 CCDC74BQ96LY2 380 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ITPAQ9BY32 194 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 SAP130Q9H0E3 1048 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 NTNG1Q9Y2I2 539 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 TRIM64A6NGJ6 449 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 OR5F1O95221 314 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 MSL3P1P0C860 447 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 RORAP35398 523 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 PEX19P40855 299 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 EEF1A1P68104 462 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 FUT7Q11130 342 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 AHSA2Q719I0 299 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 TMPRSS9Q7Z410 1059 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 OR7G1Q8NGA0 311 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 DAZLQ92904 295 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 TMEM27Q9HBJ8 222 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 COPS7AQ9UBW8 275 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 RSL24D1Q9UHA3 163 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 MPZL2O60487 215 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 SCRG1O75711 98 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 MMP11P24347 488 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 GSTT1P30711 240 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 GALNSP34059 522 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 PSMD4P55036 377 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 PMS2P3Q13401 168 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 DECR1Q16698 335 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 FAAH2Q6GMR7 532 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 SGCDQ92629 289 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF566Q969W8 418 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 ART5Q96L15 291 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC7A7Q9UM01 511 aa13.45□□□□□ -0.26
SHCBP1-201ENST00000303383 A0A087WUU8 490 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 IGHV5-10-1A0A0J9YXX1 117 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 H3BMH7 237 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 RGS10O43665 173 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 KRT20P35900 424 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 MAP3K8P41279 467 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 PEAR1Q5VY43 1037 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SPARTQ8N0X7 666 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 GNPDA2Q8TDQ7 276 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 DIO2Q92813 273 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ANKRD19PQ9H560 264 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 AMBNQ9NP70 447 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 MAN2C1Q9NTJ4 1040 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 CLN6Q9NWW5 311 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 FTSJ1Q9UET6 329 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 CHST2Q9Y4C5 530 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SYNDIG1LA6NDD5 238 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 TRIM64CA6NLI5 447 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ILKQ13418 452 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 RAB39AQ14964 217 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ELAVL1Q15717 326 aaKnown RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC23A3Q6PIS1 610 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SHISA6Q6ZSJ9 500 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 CCDC71Q8IV32 467 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 TEX47Q8TBZ9 253 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 IPCEF1Q8WWN9 437 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 LY6G6EA0A0G2JKS1 128 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 TRAPPC13A5PLN9 417 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 CDHR4A6H8M9 788 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ANKRD34CP0C6C1 535 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 BORAQ6PGQ7 559 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 GDF7Q7Z4P5 450 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ARHGAP22Q7Z5H3 698 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ZER1Q7Z7L7 766 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 FBLIM1Q8WUP2 373 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 TEX12Q9BXU0 123 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 ERVK-18Q9QC07 812 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 RPS6KB2Q9UBS0 482 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms