RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MINDY4Q4G0A6 757 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 FLYWCH1Q4VC44 716 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 CD300LDQ6UXZ3 194 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 GDF7Q7Z4P5 450 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 RABEPKQ7Z6M1 372 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 CCDC103Q8IW40 242 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 TMEM151BQ8IW70 566 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 NAT6Q93015 286 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 NODALQ96S42 347 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 VCANP13611 3396 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 A8MUA0 341 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 GKN3PP0CG01 181 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 PLAURQ03405 335 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 LPAL2Q16609 132 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 ARHGAP40Q5TG30 622 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 PRICKLE2Q7Z3G6 844 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF321PQ8N8H1 164 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 RHNO1Q9BSD3 238 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 ANKRD19PQ9H560 264 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 SCN3BQ9NY72 215 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 OR5F1O95221 314 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 SOX14O95416 240 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 CER1O95813 267 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 SLC35A2P78381 396 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 ACY1Q03154 408 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 RAB39AQ14964 217 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 NKAIN4Q8IVV8 208 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 DEPDC4Q8N2C3 294 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 ZSCAN1Q8NBB4 408 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 OR7G1Q8NGA0 311 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 FKBP10Q96AY3 582 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 NMD3Q96D46 503 aaKnown RBP20.64■□□□□ 0.89
SMAD1-201ENST00000302085 SLC41A3Q96GZ6 507 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 ITPAQ9BY32 194 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 SYNDIG1Q9H7V2 258 aa20.64■□□□□ 0.89
SMAD1-201ENST00000302085 M0R129 80 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 FAM20BO75063 409 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 CKMT1AP12532 417 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 IFNA8P32881 189 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 NNATQ16517 81 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 LAPTM4BQ86VI4 370 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 IFI44Q8TCB0 444 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 CCDC74BQ96LY2 380 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 Q9N2J8 555 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 SLC22A11Q9NSA0 550 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 SP9P0CG40 484 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 PAX7P23759 505 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 HTR2AP28223 471 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 GSTT1P30711 240 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 COX10Q12887 443 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 DECR1Q16698 335 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 PDZK1Q5T2W1 519 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 MEX3DQ86XN8 651 aaKnown RBP20.63■□□□□ 0.89
SMAD1-201ENST00000302085 PRSS58Q8IYP2 241 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 ZBTB44Q8NCP5 570 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 CLIP3Q96DZ5 547 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 OR6C1Q96RD1 312 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 GTPBP2Q9BX10 602 aaKnown RBP20.63■□□□□ 0.89
SMAD1-201ENST00000302085 PRODH2Q9UF12 536 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 CBLCQ9ULV8 474 aa20.63■□□□□ 0.89
SMAD1-201ENST00000302085 TTC36A6NLP5 189 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 DRD5P21918 477 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 SLC37A1P57057 533 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 CSNK2BP67870 215 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 ALDH6A1Q02252 535 aaKnown RBP20.62■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF730Q6ZMV8 503 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 RANBP3LQ86VV4 465 aaPredicted RBP20.62■□□□□ 0.89
SMAD1-201ENST00000302085 BCORP1Q8N888 145 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF540Q8NDQ6 660 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 MYCBPQ99417 103 aaPredicted RBP20.62■□□□□ 0.89
SMAD1-201ENST00000302085 TUBA1CQ9BQE3 449 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 SMOC1Q9H4F8 434 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 SRPK3Q9UPE1 567 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 SNX5Q9Y5X3 404 aa20.62■□□□□ 0.89
SMAD1-201ENST00000302085 TCRBV16S1A1N1A0A5B0 115 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 NPIPB9F8W1W9 429 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 PRKNO60260 465 aaPredicted RBP20.61■□□□□ 0.89
SMAD1-201ENST00000302085 TIAF1O95411 115 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 PCMT1P22061 227 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 CDC42P60953 191 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 SLX4IPQ5VYV7 408 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 RHBDD2Q6NTF9 364 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 COX15Q7KZN9 410 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 SLC38A9Q8NBW4 561 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 GNPDA2Q8TDQ7 276 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 CNOT9Q92600 299 aaKnown RBP20.61■□□□□ 0.89
SMAD1-201ENST00000302085 TSC22D3Q99576 134 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 CCDC90BQ9GZT6 254 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 MKKSQ9NPJ1 570 aaPredicted RBP20.61■□□□□ 0.89
SMAD1-201ENST00000302085 PLCXD1Q9NUJ7 323 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 IMPAD1Q9NX62 359 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 SLC7A7Q9UM01 511 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 FER1L5A0AVI2 2057 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 H3BN98 237 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 DDAH2O95865 285 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 DAB2P98082 770 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 TEKQ02763 1124 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 OR1Q1Q15612 314 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 ZNF141Q15928 474 aa20.61■□□□□ 0.89
SMAD1-201ENST00000302085 GTF2IRD2BQ6EKJ0 949 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms