RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ZNF749O43361 778 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SIGLEC6O43699 453 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 BCAS1O75363 584 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 GABARAPO95166 117 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 OR5F1O95221 314 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 CT62P0C5K7 136 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 CDK4P11802 303 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ST3GAL4Q11206 333 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 PERM1Q5SV97 790 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 C12orf73Q69YU5 71 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ZNF836Q6ZNA1 936 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 DGAT2L6Q6ZPD8 337 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SLC16A12Q6ZSM3 486 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TMPRSS9Q7Z410 1059 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ARHGAP22Q7Z5H3 698 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 B3GNT7Q8NFL0 401 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 OR52R1Q8NGF1 315 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 OR1L3Q8NH93 324 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 C9orf43Q8TAL5 461 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 PIGXQ8TBF5 258 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 PIGKQ92643 395 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 RIT1Q92963 219 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ZNF501Q96CX3 271 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 MMABQ96EY8 250 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 IL4I1Q96RQ9 567 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 PRR14Q9BWN1 585 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 POLE3Q9NRF9 147 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 PRTFDC1Q9NRG1 225 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 CUTCQ9NTM9 273 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SEMA4GQ9NTN9 838 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDPN-201ENST00000294489 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 SLC22A1O15245 554 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 CNOT3O75175 753 aaKnown RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 CBX7O95931 251 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 LCKP06239 509 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 IGFBP1P08833 259 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 STSP08842 583 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TRHRP34981 398 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 STT3AP46977 705 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 KCNAB1Q14722 419 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 OR4D9Q8NGE8 314 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ACOT11Q8WXI4 607 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 YIPF6Q96EC8 236 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 CRELD1Q96HD1 420 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 OR1F2PQ96R84 312 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SH3GL3Q99963 347 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 KRCC1Q9NPI7 259 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 NECTIN3Q9NQS3 549 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 KLHL3Q9UH77 587 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SCN2AQ99250 2005 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 USP34Q70CQ2 3546 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TMX2-CTNND1H3BSU7 103 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 KIAA0513O60268 411 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 NKX2-2O95096 273 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ONECUT2O95948 504 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SP9P0CG40 484 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 MYF5P13349 255 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 NID1P14543 1247 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 FOLR1P15328 257 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 NR4A1P22736 598 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 GIPRP48546 466 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ARL4DP49703 201 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SMSP52788 366 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 EEF1A1P68104 462 aaKnown RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 HOXC5Q00444 222 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TSPAN31Q12999 210 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 CTF1Q16619 201 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 DECR1Q16698 335 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 GUSBP11Q6P575 273 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 DBX2Q6ZNG2 339 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 GATAD2AQ86YP4 633 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 Q8N9G6 341 aaPredicted RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 C7orf57Q8NEG2 295 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TEX47Q8TBZ9 253 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SLC41A3Q96GZ6 507 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 DGAT2Q96PD7 388 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 NUDT22Q9BRQ3 303 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 ALOXE3Q9BYJ1 711 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 POLR2J2Q9GZM3 115 aaKnown RBP8.49□□□□□ -1.05
PDPN-201ENST00000294489 GAREM1Q9H706 876 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 TVP23BQ9NYZ1 205 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 SELENONQ9NZV5 590 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 NINQ8N4C6 2090 aa8.49□□□□□ -1.05
PDPN-201ENST00000294489 IGKV3D-11A0A0A0MRZ8 115 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CLDN24A6NM45 220 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 TMEM150CB9EJG8 249 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 DSCR3O14972 297 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 BRINP1O60477 761 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CDC123O75794 336 aaPredicted RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 CER1O95813 267 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CLPSP04118 112 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CKMT1AP12532 417 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CD36P16671 472 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 MAT1AQ00266 395 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms