RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CCM2LQ9NUG4 571 aaPredicted RBP8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 OLAHQ9NV23 265 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ADPRHL2Q9NX46 363 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 RPS6KA6Q9UK32 745 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 SH3GLB1Q9Y371 365 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 AP4S1Q9Y587 144 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 HEATR5AQ86XA9 2040 aa8.96□□□□□ -0.98
SNRNP40-201ENST00000263694 AGAP5A6NIR3 686 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 NPIPB9F8W1W9 429 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ACOX3O15254 700 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 FKBP6O75344 327 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SERPINB7O75635 380 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PDE9AO76083 593 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 OR6B1O95007 311 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 DIRAS1O95057 198 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 UTS2O95399 124 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ATP6V1G2O95670 118 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 BAG2O95816 211 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 F10P00742 488 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SERPINA7P05543 415 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 FESP07332 822 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ICAM2P13598 275 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 IL7RP16871 459 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PSMA4P25789 261 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 IL12BP29460 328 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC7A1P30825 629 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 KRT20P35900 424 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 DCTP40126 519 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SOX3P41225 446 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 YAP1P46937 504 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 KCNJ5P48544 419 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 VLDLRP98155 873 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 HOXC5Q00444 222 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PLAURQ03405 335 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 FOXD4Q12950 439 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 NDUFAF6Q330K2 333 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 MTX3Q5HYI7 312 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF468Q5VIY5 522 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 TSEN54Q7Z6J9 526 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 RPS19BP1Q86WX3 136 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 KRT73Q86Y46 540 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PEX5LQ8IYB4 626 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 EID3Q8N140 333 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 LILRA2Q8N149 483 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 GATSQ8NAP1 163 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 C17orf47Q8NEP4 570 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SPPL2AQ8TCT8 520 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 LRTOMTQ8WZ04 291 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 RASL10BQ96S79 203 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 G6PC3Q9BUM1 346 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 EFHD1Q9BUP0 239 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CHID1Q9BWS9 393 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 RTN4RQ9BZR6 473 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ANKRD10Q9NXR5 420 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SAMD4AQ9UPU9 718 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF443Q9Y2A4 671 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF451Q9Y4E5 1061 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 M0R3H8 397 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PPM1BO75688 479 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 DNAJB5O75953 348 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SOX30O94993 753 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 IFNA14P01570 189 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SEMG1P04279 462 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 GPIP06744 558 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ADRB1P08588 477 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 GKN3PP0CG01 181 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 UMPSP11172 480 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 FUT4P22083 530 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 RPS4Y1P22090 263 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ITGA3P26006 1051 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 EIF2S3P41091 472 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PNLIPRP2P54317 469 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ATP12AP54707 1039 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 NRG3P56975 720 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 MLF1P58340 268 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 EEF1A1P68104 462 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CHRNB3Q05901 458 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 DEFB109BQ30KR1 87 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 FAM98BQ52LJ0 330 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 BICRALQ6AI39 1079 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 HMBOX1Q6NT76 420 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 H3F3CQ6NXT2 135 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 IL20RBQ6UXL0 311 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 AMIGO2Q86SJ2 522 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 MARCH3Q86UD3 253 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 TAGAPQ8N103 731 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF248Q8NDW4 579 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 APOBEC4Q8WW27 367 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CNOT9Q92600 299 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 DUS3LQ96G46 650 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 C7orf34Q96L11 122 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 NODALQ96S42 347 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 CCNL2Q96S94 520 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PKP2Q99959 881 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 PINK1Q9BXM7 581 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 UGT2B28Q9BY64 529 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 AMBRA1Q9C0C7 1298 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 SEMA6AQ9H2E6 1030 aa8.95□□□□□ -0.98
SNRNP40-201ENST00000263694 ATP13A2Q9NQ11 1180 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms