RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 TPPPO94811 219 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TRIM23P36406 574 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 MMP12P39900 470 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 CLDN2P57739 230 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 AP3S2P59780 193 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ACOT12Q8WYK0 555 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ZNF354BQ96LW1 612 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 MFFQ9GZY8 342 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 FANCFQ9NPI8 374 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 GOSR2O14653 212 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ERI3O43414 337 aaKnown RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 SCN2BO60939 215 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TPOP07202 933 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 NFYAP23511 347 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 MNDAP41218 407 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 GBX2P52951 348 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 DSC1Q08554 894 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 SCRN3Q0VDG4 424 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 LMAN2Q12907 356 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TRAM2Q15035 370 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 NDUFA9Q16795 377 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ST3GAL2Q16842 350 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ZNF750Q32MQ0 723 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 SLC25A35Q3KQZ1 300 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 OR5M10Q6IEU7 315 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 GRHL2Q6ISB3 625 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 FAM129CQ86XR2 697 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 VRK2Q86Y07 508 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 SLC44A3Q8N4M1 653 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 WDR20Q8TBZ3 569 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 XKR8Q9H6D3 395 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 NOX3Q9HBY0 568 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TCF7L1Q9HCS4 588 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 AKAP7Q9P0M2 348 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 MRTO4Q9UKD2 239 aaKnown RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 OR2AT4A6NND4 320 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 FFAR1O14842 300 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 PCDH8O95206 1070 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 FARS2O95363 451 aaKnown RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 FURINP09958 794 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ZNF157P51786 506 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 HCCSP53701 268 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TNK1Q13470 666 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 DUSP6Q16828 381 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 POMZP3Q6PJE2 187 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 LIX1LQ8IVB5 337 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 FOXRED2Q8IWF2 684 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 SPAG16Q8N0X2 631 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 CHCHD4Q8N4Q1 142 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 DCAF4L2Q8NA75 395 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 CASTOR1Q8WTX7 329 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ZMYND19Q96E35 227 aaPredicted RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 WDFY2Q96P53 400 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 MNTQ99583 582 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 ORAI3Q9BRQ5 295 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 POLDIP3Q9BY77 421 aaKnown RBP11.58□□□□□ -0.56
USP30-201ENST00000257548 BABAM2Q9NXR7 383 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 RPS6KB2Q9UBS0 482 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 RP1P56715 2156 aa11.58□□□□□ -0.56
USP30-201ENST00000257548 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 OR14I1A6ND48 311 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 PRAMEF25A6NGN4 478 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 PEX14O75381 377 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 POP4O95707 220 aaKnown RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 CBX7O95931 251 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 HMGN1P05114 100 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 HMGN2P05204 90 aaKnown RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 ACP5P13686 325 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 FUT1P19526 365 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 POU3F2P20265 443 aaPredicted RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 NPR2P20594 1047 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 AHCYP23526 432 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 SPINT3P49223 89 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 SNRPGP62308 76 aaKnown RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 TAS1R1Q7RTX1 841 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 POGLUT1Q8NBL1 392 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 OSTF1Q92882 214 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 CD180Q99467 661 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 C12orf57Q99622 126 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 WASH6PQ9NQA3 447 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 MBD2Q9UBB5 411 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 SEC16AO15027 2179 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 F5H0A9 414 aaPredicted RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 GCM2O75603 506 aaPredicted RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 POP7O75817 140 aaKnown RBP11.57□□□□□ -0.56
USP30-201ENST00000257548 LRG1P02750 347 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 VAMP1P23763 118 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 IMPA1P29218 277 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 SORDQ00796 357 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 DOC2BQ14184 412 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 ZNF628Q5EBL2 1059 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 C3orf38Q5JPI3 329 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 QSOX2Q6ZRP7 698 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 OR4N5Q8IXE1 308 aa11.57□□□□□ -0.56
USP30-201ENST00000257548 FCAMRQ8WWV6 532 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms