RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TBL1XR1Q9BZK7 514 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 WDR55Q9H6Y2 383 aaPredicted RBP20.83■□□□□ 0.93
LSM4-201ENST00000252816 NEUROD4Q9HD90 331 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 SDHAF3Q9NRP4 125 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 DUSP22Q9NRW4 184 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 RPH3AQ9Y2J0 694 aaPredicted RBP20.83■□□□□ 0.93
LSM4-201ENST00000252816 ABCA12Q86UK0 2595 aa20.83■□□□□ 0.92
LSM4-201ENST00000252816 SCN2BO60939 215 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 COX6B1P14854 86 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 STARP49675 285 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 DSCR4P56555 118 aaPredicted RBP20.82■□□□□ 0.92
LSM4-201ENST00000252816 B3GALT5-AS1P59052 145 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 CDC73Q6P1J9 531 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 NAXEQ8NCW5 288 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 OR5AK3PQ8NH89 298 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 CHMP6Q96FZ7 201 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 SFXN2Q96NB2 322 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 STACQ99469 402 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 BTBD2Q9BX70 525 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 ACTRT3Q9BYD9 372 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 PIGUQ9H490 435 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 KCNJ16Q9NPI9 418 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 NPDC1Q9NQX5 325 aaPredicted RBP20.82■□□□□ 0.92
LSM4-201ENST00000252816 KCNE3Q9Y6H6 103 aa20.82■□□□□ 0.92
LSM4-201ENST00000252816 ARHGAP21Q5T5U3 1957 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 KIAA1549Q9HCM3 1950 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 IGLV3-32A0A0A0MS00 114 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 GOLGA8QA0A0J9YX86 632 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 GOLGA8OA6NCC3 632 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 GOLGA8NF8WBI6 632 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 OXSR1O95747 527 aaPredicted RBP20.81■□□□□ 0.92
LSM4-201ENST00000252816 ANGPTL1O95841 491 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 NGFRP08138 427 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 CPN1P15169 458 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 TBXA2RP21731 343 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 EPHA3P29320 983 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 GCKP35557 465 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 CLK3P49761 638 aaKnown RBP20.81■□□□□ 0.92
LSM4-201ENST00000252816 LHX2P50458 406 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 POU6F2P78424 691 aaPredicted RBP20.81■□□□□ 0.92
LSM4-201ENST00000252816 TTMPQ5BVD1 217 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 NSUN5P2Q63ZY6 315 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 LACC1Q8IV20 430 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 MCEMP1Q8IX19 187 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 CLEC4FQ8N1N0 589 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 TNIP2Q8NFZ5 429 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 TESCQ96BS2 214 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 TEX37Q96LM6 180 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 ENKD1Q9H0I2 346 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 GIN1Q9NXP7 522 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 APCP25054 2843 aa20.81■□□□□ 0.92
LSM4-201ENST00000252816 LRBAP50851 2863 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 PCNX3Q9H6A9 2034 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ALG1L2C9J202 215 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 FAM47E-STBD1D6RA91 191 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 RNASET2O00584 256 aaKnown RBP20.8■□□□□ 0.92
LSM4-201ENST00000252816 CEACAM8P31997 349 aaPredicted RBP20.8■□□□□ 0.92
LSM4-201ENST00000252816 SOAT1P35610 550 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 NME5P56597 212 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 SRYQ05066 204 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 SPANXN4Q5MJ08 99 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ENPP6Q6UWR7 440 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 MAVSQ7Z434 540 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ANKRD46Q86W74 232 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ZPLD1Q8TCW7 415 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ZNF75CPQ92670 426 aaPredicted RBP20.8■□□□□ 0.92
LSM4-201ENST00000252816 MOAP1Q96BY2 351 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 DTNBP1Q96EV8 351 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 ATP6V1G3Q96LB4 118 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 TRIB1Q96RU8 372 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 TUBA1CQ9BQE3 449 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 AIG1Q9NVV5 245 aa20.8■□□□□ 0.92
LSM4-201ENST00000252816 FAF1Q9UNN5 650 aaPredicted RBP20.8■□□□□ 0.92
LSM4-201ENST00000252816 CD8B2A6NJW9 211 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 TRPC5OSA6NMA1 111 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 KLF11O14901 512 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 HK1P19367 917 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 CHMP24386 653 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 TIMP3P35625 211 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 CLDN18P56856 261 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 UFM1P61960 85 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 RPS26P62854 115 aaKnown RBP20.79■□□□□ 0.92
LSM4-201ENST00000252816 C17orf67Q0P5P2 114 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 AAGABQ6PD74 315 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 GATSQ8NAP1 163 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 ADAMTS15Q8TE58 950 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 C1GALT1C1Q96EU7 318 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 SPOCK3Q9BQ16 436 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 G6PC3Q9BUM1 346 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 TRIM8Q9BZR9 551 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 SERHL2Q9H4I8 314 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 UBQLN4Q9NRR5 601 aa20.79■□□□□ 0.92
LSM4-201ENST00000252816 INTS1Q8N201 2190 aaKnown RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 PRSS51A0A1B0GVH4 220 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 HSPB2A8KAH6 182 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 SLCO1B7G3V0H7 640 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 GMFGO60234 142 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 H2AFXP16104 143 aaPredicted RBP20.78■□□□□ 0.92
LSM4-201ENST00000252816 IGFBP2P18065 325 aa20.78■□□□□ 0.92
LSM4-201ENST00000252816 LCN1P31025 176 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms