RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 AVPR1BP47901 424 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 LSSP48449 732 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 WNT4P56705 351 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 ARF3P61204 181 aaPredicted RBP20.43■□□□□ 0.86
RNF39-201ENST00000244360 RAB40BQ12829 278 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 SNAPC1Q16533 368 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 DUSP5Q16690 384 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 XKRXQ6PP77 449 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 RNF44Q7L0R7 432 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 OR4N5Q8IXE1 308 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 SIMC1Q8NDZ2 872 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 TOR1AIP2Q8NFQ8 470 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 KIAA1143Q96AT1 154 aaPredicted RBP20.43■□□□□ 0.86
RNF39-201ENST00000244360 SNX18Q96RF0 628 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 CLDND1Q9NY35 253 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 MMP17Q9ULZ9 603 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 WDR45Q9Y484 360 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 TMEM129A0AVI4 362 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 C2orf74A8MZ97 194 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 AP3D1O14617 1153 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 KLF4O43474 513 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 IDH3BO43837 385 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 CDRT1O95170 752 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 THY1P04216 161 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 IFITM2Q01629 132 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 ASAH1Q13510 395 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 LAPTM4BQ86VI4 370 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 MEX3DQ86XN8 651 aaKnown RBP20.43■□□□□ 0.86
RNF39-201ENST00000244360 FAM3CQ92520 227 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 AP3S1Q92572 193 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 SLC9A6Q92581 669 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 NECTIN4Q96NY8 510 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 PRRG3Q9BZD7 231 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 SLC22A4Q9H015 551 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 IL21RQ9HBE5 538 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 FGF20Q9NP95 211 aaPredicted RBP20.43■□□□□ 0.86
RNF39-201ENST00000244360 CPNE7Q9UBL6 633 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 MUTYHQ9UIF7 546 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 CEP290O15078 2479 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 FAM172BPA6NC97 362 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 FAM47E-STBD1D6RA91 191 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PRODHO43272 600 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 SEMA4FO95754 770 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 TSPAN19P0C672 248 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 DDOSTP39656 456 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 RABIFP47224 123 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 SLC9A3P48764 834 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 NKX2-5P52952 324 aaPredicted RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 GLYR1Q49A26 553 aaPredicted RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 SLC36A4Q6YBV0 504 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PLEKHM3Q6ZWE6 761 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PEX5LQ8IYB4 626 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 SLC22A18ASQ8N1D0 253 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 GDPD1Q8N9F7 314 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 OR13H1Q8NG92 308 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PATE1Q8WXA2 126 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 RERGQ96A58 199 aaPredicted RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 FAM46AQ96IP4 442 aaKnown RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 MCHR1Q99705 422 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PIGUQ9H490 435 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 CNIH4Q9P003 139 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 USP36Q9P275 1121 aaKnown RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 A0A087WV62 115 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 ATP1B1P05026 303 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 THBS1P07996 1170 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 IFI6P09912 130 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 STAT5AP42229 794 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 RFX2P48378 723 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 EEF1A1P68104 462 aaKnown RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 DUSP8Q13202 625 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PLK5Q496M5 336 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 MANEAQ5SRI9 462 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 ATAD3CQ5T2N8 411 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 PAQR6Q6TCH4 344 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 ZNF836Q6ZNA1 936 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 GDF7Q7Z4P5 450 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 NKAIN4Q8IVV8 208 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 KCTD7Q96MP8 289 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 SDF2Q99470 211 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 ZNF350Q9GZX5 532 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 TP63Q9H3D4 680 aaPredicted RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 CD207Q9UJ71 328 aa20.42■□□□□ 0.86
RNF39-201ENST00000244360 EXOSC1Q9Y3B2 195 aaKnown RBP20.42■□□□□ 0.86
RNF39-201ENST00000244360 KDM4EB2RXH2 506 aaPredicted RBP20.41■□□□□ 0.86
RNF39-201ENST00000244360 WWP2O00308 870 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 NTN1O95631 604 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 TNFP01375 233 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 RPS4Y1P22090 263 aaKnown RBP20.41■□□□□ 0.86
RNF39-201ENST00000244360 ETV5P41161 510 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 ETV1P50549 477 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 HOXC5Q00444 222 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 COL9A2Q14055 689 aaPredicted RBP20.41■□□□□ 0.86
RNF39-201ENST00000244360 BAK1Q16611 211 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 ZNF362Q5T0B9 420 aaPredicted RBP20.41■□□□□ 0.86
RNF39-201ENST00000244360 SLC41A3Q96GZ6 507 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 ZNF232Q9UNY5 417 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 NTNG1Q9Y2I2 539 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 ARHGEF17Q96PE2 2063 aaPredicted RBP20.41■□□□□ 0.86
RNF39-201ENST00000244360 A0A0J9YY10 115 aa20.41■□□□□ 0.86
RNF39-201ENST00000244360 ZNF860A6NHJ4 632 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms