RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 SLC35A3Q9Y2D2 325 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 EEF1E1O43324 174 aaKnown RBP17.69■□□□□ 0.42
PKD2-201ENST00000237596 MAS1P04201 325 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 GKN3PP0CG01 181 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 SLC25A25Q6KCM7 469 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 PGBD5Q8N414 524 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 ANKK1Q8NFD2 765 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 AKAP1Q92667 903 aaKnown RBP eCLIP17.69■□□□□ 0.42
PKD2-201ENST00000237596 EMCNQ9ULC0 261 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 KCNS2Q9ULS6 477 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 GPR45Q9Y5Y3 372 aa17.69■□□□□ 0.42
PKD2-201ENST00000237596 H0YGG7 62 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 IFNA7P01567 189 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 ARF3P61204 181 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 MGAT3Q09327 533 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 RUNDC3AQ59EK9 446 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 BCL2L15Q5TBC7 163 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 FKBP14Q9NWM8 211 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 HOXB9P17482 250 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 CRABP1P29762 137 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 HOXA9P31269 272 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 ARID1BQ8NFD5 2236 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 C3orf30Q96M34 536 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 USP36Q9P275 1121 aaKnown RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 RGS9O75916 674 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 UCHL1P09936 223 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 IRS1P35568 1242 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 SGSHP51688 502 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 SNU13P55769 128 aaKnown RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 SF3B4Q15427 424 aaKnown RBP eCLIP17.68■□□□□ 0.42
PKD2-201ENST00000237596 RFLNAQ6ZTI6 216 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 ARMC1Q9NVT9 282 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 CNOT11Q9UKZ1 510 aaKnown RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 NSG1A0A0A6YYJ2 146 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 IRF2P14316 349 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 OR1D4P47884 311 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 ATXN7L3Q14CW9 347 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 MLF2Q15773 248 aaPredicted RBP17.68■□□□□ 0.42
PKD2-201ENST00000237596 TAZQ16635 292 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 SLC6A7Q99884 636 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 AIFM2Q9BRQ8 373 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 STUB1Q9UNE7 303 aa17.68■□□□□ 0.42
PKD2-201ENST00000237596 ANKRD28O15084 1053 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 LRRTM2O43300 516 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 ZFAND5O76080 213 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 MAP4K2Q12851 820 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 MLC1Q15049 377 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 RTP3Q9BQQ7 232 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 A0A1B0GVC2 190 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 FAM171A2A8MVW0 826 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 TSPAN9O75954 239 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 CPMP14384 443 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 SLC25A44Q96H78 314 aaPredicted RBP17.67■□□□□ 0.42
PKD2-201ENST00000237596 DCAF13Q9NV06 445 aaKnown RBP17.67■□□□□ 0.42
PKD2-201ENST00000237596 THAP10Q9P2Z0 257 aaPredicted RBP17.67■□□□□ 0.42
PKD2-201ENST00000237596 PRKYO43930 277 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 AMY2BP19961 511 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 MAN2A2P49641 1150 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 GABARAPL2P60520 117 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 PTPRRQ15256 657 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 FAM205BPQ63HN1 556 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 LMNTD1Q8N9Z9 388 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 TRUB1Q8WWH5 349 aaKnown RBP17.67■□□□□ 0.42
PKD2-201ENST00000237596 NT5C3BQ969T7 300 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 C12orf71A8MTZ7 269 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 MAGEA8P43361 318 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 Q8N402 240 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 MCTS1Q9ULC4 181 aaKnown RBP17.67■□□□□ 0.42
PKD2-201ENST00000237596 IER3IP1Q9Y5U9 82 aa17.67■□□□□ 0.42
PKD2-201ENST00000237596 HHLA1C9JL84 531 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 LCATP04180 440 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 FAM46BQ96A09 425 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 TCTN2Q96GX1 697 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 ACOT13Q9NPJ3 140 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 SORBS2O94875 1100 aaKnown RBP17.66■□□□□ 0.42
PKD2-201ENST00000237596 TMEM225BP0DP42 221 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 FASLGP48023 281 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 SHHQ15465 462 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 CMPK2Q5EBM0 449 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 ANKRD33Q7Z3H0 272 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 WDR53Q7Z5U6 358 aaPredicted RBP17.66■□□□□ 0.42
PKD2-201ENST00000237596 RNF175Q8N4F7 328 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 PHOX2BQ99453 314 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 WDR37Q9Y2I8 494 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 ST14Q9Y5Y6 855 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 A6NIZ1 184 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 CTHP32929 405 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 MMP12P39900 470 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 RAP1BP61224 184 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 RAP1AP62834 184 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 ERV3-1Q14264 604 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 CDNFQ49AH0 187 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 KCTD11Q693B1 232 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 DTX3Q8N9I9 347 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 GALNT11Q8NCW6 608 aa17.66■□□□□ 0.42
PKD2-201ENST00000237596 MFSD8Q8NHS3 518 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms