RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 FOXF2Q12947 444 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 MPP2Q14168 576 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 MLC1Q15049 377 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ADGRE4PQ86SQ3 457 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 CDH24Q86UP0 819 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 COX18Q8N8Q8 333 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 OR4C3Q8NH37 302 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 RNASE6Q93091 150 aaKnown RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 INTS12Q96CB8 462 aaKnown RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 LRRC46Q96FV0 321 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 PAIP2Q9BPZ3 127 aaKnown RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 CXorf36Q9H7Y0 433 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
GPN3-201ENST00000228827 ATAD3AQ9NVI7 634 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 FBXO34Q9NWN3 711 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 CLCF1Q9UBD9 225 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 ZNF337Q9Y3M9 751 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 PDZD2O15018 2839 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 CSMD2Q7Z408 3487 aa12.87□□□□□ -0.35
GPN3-201ENST00000228827 DNAJC13O75165 2243 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 H0YC42 278 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 H3BML4 177 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 TM9SF1O15321 606 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 BIRC5O15392 142 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 SEC14L5O43304 696 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 OXSR1O95747 527 aaPredicted RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 OPRM1P35372 400 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 SLC1A6P48664 564 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 PRIM2P49643 509 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 TPD52P55327 224 aaPredicted RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 C17orf67Q0P5P2 114 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 TP53BP2Q13625 1128 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 PGS1Q32NB8 556 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 OR5P2Q8WZ92 322 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 CDS1Q92903 461 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 WNT2BQ93097 391 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 PRPF18Q99633 342 aaKnown RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
GPN3-201ENST00000228827 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
GPN3-201ENST00000228827 OR2M5A3KFT3 312 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 CFLARO15519 480 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 NDUFB5O43674 189 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 RCBTB2O95199 551 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 PEPDP12955 493 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 CCT3P49368 545 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 RNF144AP50876 292 aaPredicted RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 EMX2Q04743 252 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 BCL2A1Q16548 175 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.85□□□□□ -0.35
GPN3-201ENST00000228827 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 LUZP2Q86TE4 346 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 RIMKLAQ8IXN7 391 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 ANKRD42Q8N9B4 389 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 OR5AK3PQ8NH89 298 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 FAM110BQ8TC76 370 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 SH3YL1Q96HL8 342 aaPredicted RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 DUSP26Q9BV47 211 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 TGM6O95932 706 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 IL18BPO95998 194 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 MYZAPP0CAP1 466 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 HPGDP15428 266 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 TBXA2RP21731 343 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 SOAT1P35610 550 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 RPL14P50914 215 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 DIO3P55073 304 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 STX3Q13277 289 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 LSM12Q3MHD2 195 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 TNFAIP8L3Q5GJ75 292 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
GPN3-201ENST00000228827 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 NRGNQ92686 78 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 COQ8BQ96D53 544 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
GPN3-201ENST00000228827 SORT1Q99523 831 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms