RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ZNF480Q8WV37 535 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 GEMIN6Q8WXD5 167 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 EDEM2Q9BV94 578 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 P2RY12Q9H244 342 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 NKX2-4Q9H2Z4 354 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 FAM212BQ9NTI7 297 aaPredicted RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 CTSFQ9UBX1 484 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 OR2A25A4D2G3 310 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 TMEM202A6NGA9 273 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 KIAA0355O15063 1070 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 TXNL1O43396 289 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 ATG12O94817 140 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CSNK2A2P19784 350 aaPredicted RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 ADH7P40394 386 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 RGS6P49758 472 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 IRF4Q15306 451 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 BAK1Q16611 211 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 NXPE4Q6UWF7 544 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 NLRP8Q86W28 1048 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 ZNF619Q8N2I2 560 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 OR9Q2Q8NGE9 314 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 METTL21AQ8WXB1 218 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 MACROD1Q9BQ69 325 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 KLHL31Q9H511 634 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CCDC86Q9H6F5 360 aaKnown RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 CA5BQ9Y2D0 317 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 OR52A4PA6NMU1 304 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 GFRA2O00451 464 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CASKO14936 926 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 SLC31A2O15432 143 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 SAGP10523 405 aaPredicted RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 CBR1P16152 277 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 GPX4P36969 197 aaPredicted RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 CDKN2CP42773 168 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CSNK1DP48730 415 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 HSF2Q03933 536 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 POU4F2Q12837 409 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 STX4Q12846 297 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 SHHQ15465 462 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CST6Q15828 149 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 TMEM150AQ86TG1 271 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 UBQLNLQ8IYU4 475 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 OR52L1Q8NGH7 329 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 RFKQ969G6 155 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 RNFT2Q96EX2 444 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 CRB3Q9BUF7 120 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 DUSP21Q9H596 190 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 UNKLQ9H9P5 680 aaKnown RBP9.96□□□□□ -0.82
VPS18-201ENST00000220509 OSGIN1Q9UJX0 560 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 NEU3Q9UQ49 428 aa9.96□□□□□ -0.82
VPS18-201ENST00000220509 ANKRD28O15084 1053 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 CAPN5O15484 640 aaPredicted RBP9.95□□□□□ -0.82
VPS18-201ENST00000220509 GMFGO60234 142 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 THEGLP0DJG4 465 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ERP29P30040 261 aaKnown RBP9.95□□□□□ -0.82
VPS18-201ENST00000220509 HOXC5Q00444 222 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ZNF91Q05481 1191 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 SMCO1Q147U7 214 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 C22orf42Q6IC83 251 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 SMARCD3Q6STE5 483 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 RNF44Q7L0R7 432 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ASPGQ86U10 573 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ENTHD1Q8IYW4 607 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 C10orf111Q8N326 155 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 SLC5A8Q8N695 610 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ZNF740Q8NDX6 193 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 FCGR1BQ92637 280 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 FAM129BQ96TA1 746 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 CRISPLD2Q9H0B8 497 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 MCUBQ9NWR8 336 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 SLC25A37Q9NYZ2 338 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ARID1AO14497 2285 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 PRAMEF33A0A0G2JMD5 474 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ARNTLO00327 626 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 PRAMEF10O60809 474 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 PRKRAO75569 313 aaKnown RBP9.95□□□□□ -0.82
VPS18-201ENST00000220509 MPIP34949 423 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 SLC19A1P41440 591 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 RORCP51449 518 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 PROX2Q3B8N5 592 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ZNF542PQ5EBM4 170 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 CRB2Q5IJ48 1285 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ZBTB37Q5TC79 503 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 GRHL2Q6ISB3 625 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 FAM46DQ8NEK8 389 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 RSC1A1Q92681 617 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 GGHQ92820 318 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 DTD2Q96FN9 168 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 C5orf34Q96MH7 638 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 CLEC4MQ9H2X3 399 aaPredicted RBP9.95□□□□□ -0.82
VPS18-201ENST00000220509 SFXN1Q9H9B4 322 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 EXTL2Q9UBQ6 330 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 GPR34Q9UPC5 381 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 ALG5Q9Y673 324 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 MFSD2BA6NFX1 497 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 VEGFDO43915 354 aa9.95□□□□□ -0.82
VPS18-201ENST00000220509 KLHL18O94889 574 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms