RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 HpQ61646 347 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 MyorgQ69ZQ1 716 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 VwdeQ6DFV8 926 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 2810408A11RikQ6NSU2 435 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 RragdQ7TT45 449 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pcyt1bQ811Q9 369 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Plekha1Q8BUL6 383 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fam221bQ8C627 487 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Wdr26Q8C6G8 641 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r203Q8R273 311 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r81Q8R286 306 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Asz1Q8VD46 475 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr1241Q8VF91 314 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr1423Q8VFV0 310 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr853Q8VGG6 305 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 AldobQ91Y97 364 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tmem88Q9D0N8 159 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Isyna1Q9JHU9 557 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pex11bQ9Z210 259 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 H2afb2S4R1M3 115 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gbf1Q6DFZ1 1861 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Bclaf3A2AG58 752 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm13102A2ASJ3 519 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mroh7A2AVR2 1279 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Skint4A7TZF3 474 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm15446D3Z5Y8 553 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Daw1D3Z7A5 415 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm15130F6PYN5 206 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Top6blJ3QMY9 579 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc22a1O08966 556 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc18a3O35304 530 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Edil3O35474 480 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Suv39h1O54864 412 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acsl1P41216 699 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 HnrnpkP61979 463 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Eif4eP63073 217 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Adcyap1r1P70205 496 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ldb1P70662 411 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 PepdQ11136 493 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Eif1adQ3THJ3 170 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Foxk2Q3UCQ1 651 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Akr1clQ3UXL1 322 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 ThrspQ62264 150 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cypt2Q6P924 180 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr1031Q7TR87 336 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tm9sf4Q8BH24 643 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Hcar1Q8C131 343 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 MmaaQ8C7H1 415 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 CdnfQ8CC36 187 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc35e4Q8K3D6 351 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r193Q8R258 319 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gtf2h3Q8VD76 309 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ptgr1Q91YR9 329 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tspan31Q9CQ88 210 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tpd52l2Q9CYZ2 220 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acbd7Q9D258 88 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cyp3a44Q9EQW4 504 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rtp4Q9ER80 249 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 MvkQ9R008 395 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mixl1Q9WUI0 231 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Nrxn2E9Q7X7 1710 aa9.19□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm31371A0A1D5RM70 265 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm21964A0A1W2P7S4 437 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm14085A2AWR5 660 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm11168J3QN50 228 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Bcl2a1dO55179 172 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pip5k1cO70161 661 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cd93O89103 644 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Hoxb3P09026 433 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Atxn1lP0C7T6 687 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ifi204P0DOV2 619 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Csf2rbP26955 896 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mmp2P33434 662 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Sesn1P58006 492 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Bcl2a1Q07440 172 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rasl12Q08AT1 266 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fam98aQ3TJZ6 515 aaKnown RBP9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Alg11Q3TZM9 492 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr331Q5NC44 324 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Dyrk1aQ61214 763 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Kif18bQ6PFD6 834 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 MtdhQ80WJ7 579 aaKnown RBP9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Lrfn4Q80XU8 636 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mief1Q8BGV8 463 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Bpifb2Q8C1E1 462 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ifnl3Q8CGK6 193 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mfsd14bQ8CIA9 507 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Uqcc3Q8K2T4 89 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SdslQ8R238 329 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cyp2c50Q91X77 490 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Etv5Q9CXC9 510 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Med10Q9CXU0 135 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acbd6Q9D061 282 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 NkapQ9D0F4 415 aaKnown RBP9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 PaicsQ9DCL9 425 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gpr88Q9EPB7 384 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ap4m1Q9JKC7 449 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Zfp236S4R299 1847 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r82A0A087WRV1 305 aa9.18□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cd300cA2A7V7 229 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms