RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Carnmt1Q80UY1 400 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zbtb46Q8BID6 600 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Faim2Q8K097 317 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dcun1d3Q8K0V2 304 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Art3Q8R2G4 371 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rdh10Q8VCH7 341 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mbd3l1Q9D9H3 186 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PaicsQ9DCL9 425 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr44Q9EQB8 314 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 B3galt5Q9JI67 308 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Arpc3Q9JM76 178 aaKnown RBP9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nup210Q9QY81 1886 aaKnown RBP9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm21865A0A087WRL2 222 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 IghdA0A0A6YW14 291 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Sac3d1A6H687 427 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Skint9A7TZG3 319 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn1r13G5E8I3 300 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn2r117K7N6V1 857 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Hps1O08983 704 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tcea1P10711 301 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gabra3P26049 492 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Adh5P28474 374 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Sf3b6P59708 125 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ddx5Q61656 614 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 SypQ62277 314 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Alg8Q6P8H8 526 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 SelenoiQ80TA1 398 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Kctd7Q8BJK1 289 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Znf689Q8BKK5 500 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Klf8Q8BLM0 355 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rhbdd3Q8BP97 385 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Banf2Q8BVR0 90 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Irf2bplQ8K3X4 775 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mptx1Q8R1M8 219 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr643Q8VGY1 314 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Idh3bQ91VA7 384 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tmem168Q91VX9 697 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Klhl22Q99JN2 634 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cstf1Q99LC2 431 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rcbtb2Q99LJ7 551 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc10a6Q9CXB2 373 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cmtm8Q9CZR4 173 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pex13Q9D0K1 405 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 DynapQ9D7M5 161 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Jph3Q9ET77 744 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tmem37Q9JJV3 211 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Srpk3Q9Z0G2 565 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm13420A0A140LJJ2 248 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 1700023F06RikA2AB62 382 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ssxa1B1AUS7 101 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm10799F7C7U2 104 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 FpgtG5E8F4 590 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn2r13L7N1X2 831 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PlauP06869 433 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cdk5P49615 292 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Alox12eP55249 662 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Bmp1P98063 991 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fam187bQ0VAY3 358 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Acss3Q14DH7 682 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Defb43Q30KM9 69 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Kdm4dQ3U2K5 510 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ccser2Q3UHI0 833 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Commd6Q3V4B5 87 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Coq8aQ60936 645 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Arhgef39Q66JY6 344 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1140Q7TR39 311 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr598Q7TRR2 319 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc26a11Q80ZD3 593 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dcaf12l2Q8BGW4 469 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Med19Q8C1S0 244 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ttc23Q8CHY7 488 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd207Q8VBX4 331 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zdhhc5Q8VDZ4 715 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr108Q8VFA1 320 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Izumo2Q9DA16 220 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ap3s1Q9DCR2 193 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Chrm3Q9ERZ3 589 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tsga8Q9JJL0 238 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Nrip3Q9JJR9 240 aa9.21□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zdbf2Q5SS00 2493 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Igkv4-86A0A0G2JGE7 114 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PvrigA0A1B0GS01 234 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mamdc4A2AJA7 1228 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rnf13O54965 381 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 ChrneP20782 493 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Timp2P25785 220 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Apoc3P33622 99 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc1a3P56564 543 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cdh10P70408 788 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 CcnjQ3TZI6 379 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vwa5b2Q3UR50 1248 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Smarcd3Q6P9Z1 483 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp866Q6PGD2 520 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 C8bQ8BH35 589 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ssuh2Q8C3L1 340 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Lgi4Q8K1S1 537 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Kiaa0513Q8R0A7 407 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dhcr24Q8VCH6 516 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr474Q8VFC9 310 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr103Q920Y8 313 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms