RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Slc43a1Q8BSM7 564 aa17.6■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr53Q8VGL8 312 aa17.6■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mzt2Q9CQ25 159 aa17.6■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lrrc69Q9D9Q0 347 aa17.6■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Upf1Q9EPU0 1124 aaKnown RBP17.6■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Trbv21A0A0A6YX06 97 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mfsd13bA0A1L1SUA2 455 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Sac3d1A6H687 427 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Rnpepl1G5E872 720 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Hsd3b2P26149 373 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Fgf9P54130 208 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Bglap3P54615 95 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 SgcgP82348 291 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 DmwdQ08274 665 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Defb43Q30KM9 69 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Wdr20Q3UWE6 569 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 C130050O18RikQ497Y9 356 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Znf728Q6P5C7 752 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Zfp866Q6PGD2 520 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Kxd1Q80XH1 177 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Kctd7Q8BJK1 289 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Crispld1Q8CGD2 500 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 DutQ8VCG1 200 aaKnown RBP17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr952Q8VFD7 314 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr1346Q8VGH6 313 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr1Q8VGI1 314 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Asb8Q91ZT9 288 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Slc35b3Q922Q5 369 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mgat4dQ9D4R2 373 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr955Q9EQ97 314 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Acss2Q9QXG4 701 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Nr4a3Q9QZB6 627 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 HraslsQ9QZU4 167 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mpeg1A1L314 713 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm595A2AF73 655 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Xpnpep2B1AVD1 674 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm7714E9Q079 131 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn2r117K7N6V1 857 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn1r20K7N778 303 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 NgpO08692 167 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Yme1l1O88967 715 aaKnown RBP17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 DhfrP00375 187 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 TP20293 436 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 ChrneP20782 493 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Hoxc5P32043 222 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Alox12eP55249 662 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Usp30Q3UN04 517 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Trim45Q6PFY8 580 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr684Q7TRN8 312 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Slc26a11Q80ZD3 593 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Atg4bQ8BGE6 393 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lypd4Q8BVP6 246 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Cdc123Q8CII2 336 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Spns1Q8R0G7 528 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ugt2b37Q8VCN3 530 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ddx28Q9CWT6 540 aaKnown RBP17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tmem35aQ9D328 167 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 DynapQ9D7M5 161 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ap3s1Q9DCR2 193 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Spry1Q9QXV9 313 aa17.59■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 CtcflA2APF3 636 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tgm7A2ART8 616 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm14399A2ARW8 610 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn1r9A2RST7 299 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Esp31A8R0W3 114 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 BC035947B2RQY6 695 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lgals7O54974 136 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lancl1O89112 399 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 E330014E10RikQ3UL33 481 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Cdk10Q3UMM4 360 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 D5Ertd577eQ499F0 481 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Sema3bQ62177 748 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lamp3Q7TST5 411 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 SnupnQ80W37 358 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Slc38a9Q8BGD6 560 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mfsd11Q8BJ51 449 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Cxcl16Q8BSU2 246 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gatad2aQ8CHY6 629 aaKnown RBP17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Dync2li1Q8K0T2 351 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Plekho2Q8K124 495 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Akr1c21Q91WR5 323 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr459Q924H8 314 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tssk6Q925K9 273 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Eral1Q9CZU4 437 aaKnown RBP17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tinf2Q9QXG9 341 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn1r10W4VSP8 311 aa17.58■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Zfp534A2A7A1 661 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Skint9A7TZG3 319 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Btbd16E9Q173 522 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 OtcP11725 354 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Acp2P24638 423 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 AcadlP51174 430 aaKnown RBP17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Lad1P57016 528 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Fam187bQ0VAY3 358 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 1700066B19RikQ3TS39 127 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Snx33Q4VAA7 574 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Cxcl17Q5UW37 119 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Fam205cQ80YD3 371 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Slc22a29Q8BWG6 551 aa17.58■□□□□ 0.4
Shkbp1-201ENSMUST00000003857 Eri3Q8C460 337 aa17.58■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms