RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NCF1	P14598	390 aa	Predicted RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	OGN	P20774	298 aa	Known RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	RPL22	P35268	128 aa	Known RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	CPOX	P36551	454 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	GRIA1	P42261	906 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	STX1B	P61266	288 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	ARHGAP19	Q14CB8	494 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	NKAIN1	Q4KMZ8	207 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	IGSF11	Q5DX21	431 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	MLIP	Q5VWP3	458 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	LRRC8B	Q6P9F7	803 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	KCTD9	Q7L273	389 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	TRIM73	Q86UV7	250 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	DNAJC22	Q8N4W6	341 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	MNS1	Q8NEH6	495 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	CFAP61	Q8NHU2	1237 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	HMGCLL1	Q8TB92	370 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	PNPLA2	Q96AD5	504 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	MIB2	Q96AX9	1013 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	GAL3ST4	Q96RP7	486 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	CADM1	Q9BY67	442 aa	Known RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	WDR54	Q9H977	334 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	CHRAC1	Q9NRG0	131 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	ASB6	Q9NWX5	421 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	SPHK1	Q9NYA1	384 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	PEMT	Q9UBM1	199 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	KLK4	Q9Y5K2	254 aa		5.84	□□□□□ -1.48
CASC19-238	ENST00000641523	MED13	Q9UHV7	2174 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CREBBP	Q92793	2442 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ICE1	Q9Y2F5	2266 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523		A0A0U1RQJ8	604 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523		E5RI56	91 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SLC33A1	O00400	549 aa	Predicted RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	VPS26A	O75436	327 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SEC31A	O94979	1220 aa	Known RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	VAPB	O95292	243 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CAT	P04040	527 aa	Known RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CAPN1	P07384	714 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CHRM4	P08173	479 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ERVK-10	P10266	1014 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	MAG	P20916	626 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	OTX2	P32243	289 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	MAGEA6	P43360	314 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	KCNJ1	P48048	391 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	GABRA4	P48169	554 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SOX2	P48431	317 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CSTF3	Q12996	717 aa	Known RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	RIPK1	Q13546	671 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SIX1	Q15475	284 aa	Predicted RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ZIC1	Q15915	447 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	DCAF10	Q5QP82	559 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	PRAMEF17	Q5VTA0	474 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	HEPHL1	Q6MZM0	1159 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	LRRC8E	Q6NSJ5	796 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	PRMT9	Q6P2P2	845 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CASC4	Q6P4E1	433 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	RRM2B	Q7LG56	351 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CDH26	Q8IXH8	852 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	KLHL7	Q8IXQ5	586 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	IQCK	Q8N0W5	287 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	MMP21	Q8N119	569 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ZBTB2	Q8N680	514 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	TMEM217	Q8N7C4	229 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	BANP	Q8N9N5	519 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	NHLRC2	Q8NBF2	726 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	FLVCR1-AS1	Q8TAF5	88 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	NEU4	Q8WWR8	484 aa	Predicted RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	GIMAP5	Q96F15	307 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ZNF778	Q96MU6	729 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SELENOS	Q9BQE4	189 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	P2RY12	Q9H244	342 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	SLC26A1	Q9H2B4	701 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	TOR3A	Q9H497	397 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523		Q9N2J8	555 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	FAM60A	Q9NP50	221 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	ANKMY1	Q9P2S6	941 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	HSPB7	Q9UBY9	170 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	TTC7A	Q9ULT0	858 aa	Predicted RBP	5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	PLAGL1	Q9UM63	463 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	CDC14A	Q9UNH5	594 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	RELN	P78509	3460 aa		5.83	□□□□□ -1.48
CASC19-238	ENST00000641523	LOC102723996	A0A087X1L8	192 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	CTAGE15	A4D2H0	777 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	SDR42E2	A6NKP2	422 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523		A6NL46	340 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	POC1B-GALNT4	F8VUJ3	575 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523		H3BMH7	237 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	PGRMC1	O00264	195 aa	Known RBP	5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	TXNDC9	O14530	226 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	KLF7	O75840	302 aa	Predicted RBP	5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	SORBS2	O94875	1100 aa	Known RBP	5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	CBX6	O95503	412 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	C1orf105	O95561	183 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	DIRAS3	O95661	229 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	ZSCAN5DP	P0CG00	497 aa		5.82	□□□□□ -1.48
CASC19-238	ENST00000641523	NHLRC4	P0CG21	123 aa	Predicted RBP	5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms