RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 GLTPD2A6NH11 291 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CBX4O00257 560 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PLRG1O43660 514 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ABCB7O75027 752 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TGFB1P01137 390 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CEBPBP17676 345 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PPT1P50897 306 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 NDUFA8P51970 172 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 LSM11P83369 360 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TAF9Q16594 264 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PADI6Q6TGC4 694 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ACBD7Q8N6N7 88 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR14A16Q8NHC5 309 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 SENP8Q96LD8 212 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF382Q96SR6 550 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HDAC8Q9BY41 377 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 IKZF3Q9UKT9 509 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TICRRQ7Z2Z1 1910 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TGIF2-C20orf24A0A0A6YYL0 155 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 C4orf47A7E2U8 309 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 AP4M1O00189 453 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 KDELR3O43731 214 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MYF6P23409 242 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 GTF2BQ00403 316 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CACNB1Q02641 598 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MVKQ03426 396 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PRKCDQ05655 676 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 AQP6Q13520 282 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HIST2H2ACQ16777 129 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF773Q6PK81 442 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 KCTD1Q719H9 257 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 APTXQ7Z2E3 356 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CLEC10AQ8IUN9 316 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM102Q8N9M5 508 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 SMG8Q8ND04 991 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PROKR2Q8NFJ6 384 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 LINC00052Q96N35 136 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR8B4Q96RC9 309 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 NUDT9Q9BW91 350 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TBL1XR1Q9BZK7 514 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HRH4Q9H3N8 390 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PDE10AQ9Y233 779 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 FIS1Q9Y3D6 152 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 LTN1O94822 1766 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM265A0A087WTH1 108 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 A8MXK9 166 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MYL12BO14950 172 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 EDF1O60869 148 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 C8GP07360 202 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MYL12AP19105 171 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CSNK2A2P19784 350 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR5I1Q13606 314 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 SLC10A1Q14973 349 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PARP15Q460N3 678 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR13D1Q8NGV5 346 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR5AK3PQ8NH89 298 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MAPK15Q8TD08 544 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 SDR42E1Q8WUS8 393 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TNFAIP8L1Q8WVP5 186 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 UBE2FQ969M7 185 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR2M4Q96R27 311 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OMDQ99983 421 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 WDR11Q9BZH6 1224 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CIPCQ9C0C6 399 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 DHX35Q9H5Z1 703 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HEY2Q9UBP5 337 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PCYOX1Q9UHG3 505 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ZDHHC8Q9ULC8 765 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 DOCK2Q92608 1830 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TRAV25A0A0B4J276 109 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ATP6AP2A0A1C7CYW4 349 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 C9orf172C9J069 976 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 RP2O75695 350 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 BMP4P12644 408 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TAC1P20366 129 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 KDELR2P33947 212 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 UBE2KP61086 200 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 SNRPD2P62316 118 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 INSM1Q01101 510 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PDZK1IP1Q13113 114 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ABRAXAS2Q15018 415 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF404Q494X3 552 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 FAM131AQ6UXB0 335 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR13C5Q8NGS8 318 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 OR13J1Q8NGT2 312 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 MMP19Q99542 508 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM184BQ9Y519 407 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ALG6Q9Y672 507 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 A0A087WZ62 844 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 TRBV11-1A0A0K0K1C0 115 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF587BE7ETH6 402 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 PEX12O00623 359 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 CNR1P21554 472 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HTR2AP28223 471 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 RPS15P62841 145 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 HNRNPA0Q13151 305 aaKnown RBP4.07□□□□□ -1.76
SCN3A-209ENST00000639244 GTF2H2Q13888 395 aa4.07□□□□□ -1.76
SCN3A-209ENST00000639244 NECTIN1Q15223 517 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms