RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MSH3P20585 1137 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CHATP28329 748 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TEAD1P28347 426 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 EPHX2P34913 555 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PTGER4P35408 488 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MAS1LP35410 378 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MMP12P39900 470 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CD79BP40259 229 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TNFRSF4P43489 277 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 COMPP49747 757 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 STK19P49842 368 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MMP15P51511 669 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TPMTP51580 245 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CCL11P51671 97 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ART1P52961 327 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CDH12P55289 794 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CLDN18P56856 261 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 DLK1P80370 383 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MRPS25P82663 173 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MRPS34P82930 218 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MYBPC1Q00872 1141 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 IL9RQ01113 521 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CHRNB3Q05901 458 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 EFNB3Q15768 340 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MICBQ29980 383 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF284Q2VY69 593 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 NDUFAF6Q330K2 333 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 C5orf47Q569G3 176 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PRAMEF19Q5SWL8 479 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SEL1L2Q5TEA6 688 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF691Q5VV52 312 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 AGAP6Q5VW22 663 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 KHDRBS2Q5VWX1 349 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LIPNQ5VXI9 398 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM225Q6GV28 225 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LRRC8EQ6NSJ5 796 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SHC4Q6S5L8 630 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CD300LGQ6UXG3 332 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 QSOX2Q6ZRP7 698 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SLC16A12Q6ZSM3 486 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MRPL21Q7Z2W9 205 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PATL1Q86TB9 770 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ANKRD46Q86W74 232 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TMEM173Q86WV6 379 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TDRPQ86YL5 185 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CBWD2Q8IUF1 395 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CLVS1Q8IUQ0 354 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SFTPA2Q8IWL1 248 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SLC35F3Q8IY50 421 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PCDH20Q8N6Y1 951 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LRRC17Q8N6Y2 441 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CCDC185Q8N715 623 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 NANOGP1Q8N7R0 232 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 NECAP1Q8NC96 275 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 KIAA0895Q8NCT3 520 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CCDC197Q8NCU1 140 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CCDC112Q8NEF3 446 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 GJC3Q8NFK1 279 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 OR4D6Q8NGJ1 314 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ACTL9Q8TC94 416 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 GIPC3Q8TF64 312 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SETD7Q8WTS6 366 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SLC35F5Q8WV83 523 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SPRYD4Q8WW59 207 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SORCS1Q8WY21 1168 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 DAZLQ92904 295 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 GLYATL1Q969I3 302 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ORAI1Q96D31 301 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SENP5Q96HI0 755 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MARK4Q96L34 752 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF578Q96N58 590 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SFXN2Q96NB2 322 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 VPS35Q96QK1 796 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ACOX2Q99424 681 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CMKLR1Q99788 373 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 C17orf62Q9BQA9 187 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF251Q9BRH9 671 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CENPKQ9BS16 269 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 WRAP53Q9BUR4 548 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 RBM24Q9BX46 236 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CALN1Q9BXU9 219 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LHPPQ9H008 270 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SPRTNQ9H040 489 aaPredicted RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 OR51B5Q9H339 312 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 NARFLQ9H6Q4 476 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ZDHHC6Q9H6R6 413 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 WDR54Q9H977 334 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MCCC2Q9HCC0 563 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 BPIFA1Q9NP55 256 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 FZD3Q9NPG1 666 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 OR2S2Q9NQN1 319 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 BATF3Q9NR55 127 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PXMP2Q9NR77 195 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 SMOXQ9NWM0 555 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CD274Q9NZQ7 290 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PIPOXQ9P0Z9 390 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 TXNDC16Q9P2K2 825 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 POLKQ9UBT6 870 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 COPS7AQ9UBW8 275 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms