RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PISDQ9UG56 409 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 MKLN1Q9UL63 735 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CBLCQ9ULV8 474 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PPIEQ9UNP9 301 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF443Q9Y2A4 671 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PCDHGA3Q9Y5H0 932 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ORC6Q9Y5N6 252 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DNAH14Q0VDD8 3507 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 LAMA1P25391 3075 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 C2orf92A0A1B0GVN3 265 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 PRAMEF25A6NGN4 478 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 TO15178 435 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DENRO43583 198 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 GDF9O60383 454 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CNOT3O75175 753 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 STK17BO94768 372 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DKK1O94907 266 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DIRAS1O95057 198 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 GADD45GO95257 159 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ZIC2O95409 532 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 IGHEP01854 428 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ALPLP05186 524 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 RAB40ALP0C0E4 278 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CT45A8P0DMV1 189 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CT45A9P0DMV2 189 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CDH2P19022 906 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ITIH1P19827 911 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 IFNA8P32881 189 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 KRT20P35900 424 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ETV5P41161 510 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 HMGA2P52926 109 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 IST1P53990 364 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 EEF1A1P68104 462 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 MED21Q13503 144 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 NCF4Q15080 339 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 EBPQ15125 230 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CT45A2Q5DJT8 189 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 COLEC12Q5KU26 742 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CCNJQ5T5M9 372 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 HES3Q5TGS1 186 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 RNF220Q5VTB9 566 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 FAAH2Q6GMR7 532 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 LCN10Q6JVE6 187 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 FAM198BQ6UWH4 519 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DHRS13Q6UX07 377 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DEF8Q6ZN54 512 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 LANCL3Q6ZV70 420 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 OLIG3Q7RTU3 272 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CPEB2Q7Z5Q1 589 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 TSEN54Q7Z6J9 526 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF605Q86T29 641 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 VRK2Q86Y07 508 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 CMIPQ8IY22 773 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 TAGAPQ8N103 731 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 BCORP1Q8N888 145 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 GALNT6Q8NCL4 622 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 B3GNT7Q8NFL0 401 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 VANGL1Q8TAA9 524 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 MAGEE2Q8TD90 523 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 PHF10Q8WUB8 498 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 RNF31Q96EP0 1072 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 HSPBAP1Q96EW2 488 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 LCORQ96JN0 433 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 LPAR4Q99677 370 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 NUDT9Q9BW91 350 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 FAM117AQ9C073 453 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 SEMA4CQ9C0C4 833 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 POLR2J2Q9GZM3 115 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 WWTR1Q9GZV5 400 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 HOXD1Q9GZZ0 328 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 QRSL1Q9H0R6 528 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 POLR2J3Q9H1A7 115 aaKnown RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 VNN3Q9NY84 501 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 KIF17Q9P2E2 1029 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 KCND3Q9UK17 655 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ACAD8Q9UKU7 415 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 PADI1Q9ULC6 663 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 TMCC3Q9ULS5 477 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 DTX4Q9Y2E6 619 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 TESMINQ9Y4I5 508 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 LYVE1Q9Y5Y7 322 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 B3GALT1Q9Y5Z6 326 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 AP4B1Q9Y6B7 739 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 U3KQV3 271 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 GVINP1Q7Z2Y8 2422 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 KNL1Q8NG31 2342 aa6.98□□□□□ -1.29
PTP4A1-206ENST00000627002 ARID1BQ8NFD5 2236 aaPredicted RBP6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 PI4KAP42356 2102 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 SPTBN4Q9H254 2564 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 A0A1W2PRQ8 180 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 C7orf72A4D263 438 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 ARRDC5A6NEK1 342 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 H0YAE9 185 aa6.97□□□□□ -1.29
PTP4A1-206ENST00000627002 M0R3H8 397 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms