RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FKBP14Q9NWM8 211 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 REV1Q9UBZ9 1251 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 SPAG17Q6Q759 2223 aa15.21■□□□□ 0.02
LDB3-208ENST00000623007 TRAPPC13A5PLN9 417 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 CDHR4A6H8M9 788 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 DSCR3O14972 297 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 XPNPEP2O43895 674 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 GIMD1P0DJR0 217 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 POU2F1P14859 743 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 S1PR1P21453 382 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 PCMT1P22061 227 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 STAT5AP42229 794 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 EMX1Q04741 257 aaPredicted RBP15.2■□□□□ 0.02
LDB3-208ENST00000623007 TMEM201Q5SNT2 666 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 CWF19L1Q69YN2 538 aaKnown RBP15.2■□□□□ 0.02
LDB3-208ENST00000623007 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 RPL13AP3Q6NVV1 102 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 ZNF613Q6PF04 617 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 SLC43A2Q8N370 569 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 CLDN22Q8N7P3 220 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 TEX47Q8TBZ9 253 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 APH1BQ8WW43 257 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 HS6ST2Q96MM7 605 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 VSTM2LQ96N03 204 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 ZNF559Q9BR84 538 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 RSPO3Q9BXY4 272 aaPredicted RBP15.2■□□□□ 0.02
LDB3-208ENST00000623007 SLC25A19Q9HC21 320 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 TMEM5Q9Y2B1 443 aa15.2■□□□□ 0.02
LDB3-208ENST00000623007 TRIM64BA6NI03 449 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 H3BMH7 237 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 KCNK2O95069 426 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 HTR1AP08908 422 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CT62P0C5K7 136 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 TDGF1P13385 188 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 FPR3P25089 353 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 EMDP50402 254 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 DCAF7P61962 342 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 DMWDQ09019 674 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 BNIP3Q12983 259 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 EXOSC7Q15024 291 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 FLYWCH1Q4VC44 716 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 RASSF6Q6ZTQ3 369 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 MBOAT2Q6ZWT7 520 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZNF550Q7Z398 422 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 SLITRK4Q8IW52 837 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZNF440Q8IYI8 595 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 OSTF1Q92882 214 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 SLC41A3Q96GZ6 507 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZC3H10Q96K80 434 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 SLC38A2Q96QD8 506 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 SIGLEC11Q96RL6 698 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 POLDIP3Q9BY77 421 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 QRSL1Q9H0R6 528 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 A0A087WUU8 490 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 A0A1B0GX78 115 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 HTR3EA5X5Y0 456 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 M0R3G1 203 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 IFNA16P05015 189 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CDK1P06493 297 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CCNA2P20248 432 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 DRD5P21918 477 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 MMP11P24347 488 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 PEX19P40855 299 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 GCGRP47871 477 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 PSG6Q00889 435 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZNF141Q15928 474 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 OCLNQ16625 522 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.19■□□□□ 0.02
LDB3-208ENST00000623007 GPR107Q5VW38 600 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 NKAIN2Q5VXU1 208 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZER1Q7Z7L7 766 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 BPHLQ86WA6 291 aaPredicted RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 ANKRD13BQ86YJ7 626 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CDK20Q8IZL9 346 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 C12orf43Q96C57 262 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 MPP4Q96JB8 637 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 SLC46A1Q96NT5 459 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 CCNL2Q96S94 520 aaPredicted RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 LHPPQ9H008 270 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 SPRTNQ9H040 489 aaPredicted RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 OR10A5Q9H207 317 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 TMEM27Q9HBJ8 222 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZNF304Q9HCX3 659 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 MKKSQ9NPJ1 570 aaPredicted RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 WARS2Q9UGM6 360 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 KLHL3Q9UH77 587 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 FBXO4Q9UKT5 387 aa15.19■□□□□ 0.02
LDB3-208ENST00000623007 RPL36Q9Y3U8 105 aaKnown RBP15.19■□□□□ 0.02
LDB3-208ENST00000623007 CPSF4LA6NMK7 179 aaKnown RBP15.18■□□□□ 0.02
LDB3-208ENST00000623007 ENO4A6NNW6 628 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 POLR1CO15160 346 aaPredicted RBP15.18■□□□□ 0.02
LDB3-208ENST00000623007 ZIC2O95409 532 aaPredicted RBP15.18■□□□□ 0.02
LDB3-208ENST00000623007 TNNI3P19429 210 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 POU1F1P28069 291 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 SLC5A2P31639 672 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 GSSP48637 474 aa15.18■□□□□ 0.02
LDB3-208ENST00000623007 ZNF267Q14586 743 aaPredicted RBP15.18■□□□□ 0.02
LDB3-208ENST00000623007 SHBQ15464 509 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms