RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TRPC4APQ8TEL6 797 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 AKAP1Q92667 903 aaKnown RBP eCLIP3.15□□□□□ -1.91
LPP-220ENST00000617246 CHCHD6Q9BRQ6 235 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 COL4A6Q14031 1691 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ACOT8O14734 319 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 VAPBO95292 243 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ANKRD34CP0C6C1 535 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LMO2P25791 158 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 MAOBP27338 520 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 HTR4Q13639 388 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 AADACL2Q6P093 401 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 STX12Q86Y82 276 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ZNF567Q8N184 647 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 OR5T2Q8NGG2 359 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 DNAJA4Q8WW22 397 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 ZNF689Q96CS4 500 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 URM1Q9BTM9 101 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 UCK2Q9BZX2 261 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 COL20A1Q9P218 1284 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LAMP5Q9UJQ1 280 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NPEPPSL1A6NEC2 478 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ACOX3O15254 700 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CTDNEP1O95476 244 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SRCP12931 536 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 TPSB2P20231 275 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 HTR5AP47898 357 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 TARDBPQ13148 414 aaKnown RBP eCLIP3.15□□□□□ -1.91
LPP-220ENST00000617246 TOP3AQ13472 1001 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 GGTLC2Q14390 218 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 TPSAB1Q15661 275 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SIRT6Q8N6T7 355 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 PTGR2Q8N8N7 351 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 PGM2Q96G03 612 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 GPR78Q96P69 363 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FUCA2Q9BTY2 467 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SSR3Q9UNL2 185 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LIPT1Q9Y234 373 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SLC6A5Q9Y345 797 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 M0R2N6 131 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CASC3O15234 703 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 ATP6V1G1O75348 118 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 POP7O75817 140 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 TBPP20226 339 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NRG1Q02297 640 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 CHRNEQ04844 493 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 DNAJC3Q13217 504 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SLC5A9Q2M3M2 681 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RTL6Q6ICC9 239 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RAB12Q6IQ22 244 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NLRP14Q86W24 1093 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 A0A087WZY1 265 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 A0A1B0GTQ1 180 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 M0R233 179 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 HSD3B1P14060 373 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 GCGRP47871 477 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 GALEQ14376 348 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CPSF6Q16630 551 aaKnown RBP eCLIP3.15□□□□□ -1.91
LPP-220ENST00000617246 CA9Q16790 459 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LRRC73Q5JTD7 316 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 DCAF12L2Q5VW00 463 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LIPJQ5W064 366 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 C19orf18Q8NEA5 215 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 EME1Q96AY2 570 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ZSWIM1Q9BR11 485 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FAM92AA1XBS5 289 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 MAGEB4O15481 346 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 JTBO76095 146 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 VSIG10L2P0DP72 767 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ART1P52961 327 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ATP5J2P56134 94 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 TMEM267Q0VDI3 215 aaPredicted RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 PLA2G7Q13093 441 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RBM48Q5RL73 367 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 SSX6Q7RTT6 188 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ENTHD1Q8IYW4 607 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FAM168AQ92567 244 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 POPDC3Q9HBV1 291 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CLN6Q9NWW5 311 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 OR5H8P0DN80 308 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 EDNRBP24530 442 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ACVR2AP27037 513 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RPS14P62263 151 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 RSU1Q15404 277 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NYAP1Q6ZVC0 841 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LARP4Q71RC2 724 aaKnown RBP eCLIP3.15□□□□□ -1.91
LPP-220ENST00000617246 MFSD4AQ8N468 514 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NOA1Q8NC60 698 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 UTP15Q8TED0 518 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 CNBD2Q96M20 576 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RHBDL2Q9NX52 303 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 YBX2Q9Y2T7 364 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A6P0DMU7 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A5P0DMU8 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A7P0DMV0 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A8P0DMV1 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A9P0DMV2 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ANXA8P13928 327 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LIMS1P48059 325 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ZNF763Q0D2J5 394 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms