RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ADRM1Q16186 407 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 GRAMD1BQ3KR37 738 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF766Q5HY98 468 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 PCSK4Q6UW60 755 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 NET1Q7Z628 596 aaPredicted RBP14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 SERPINA11Q86U17 422 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 CALHM3Q86XJ0 350 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 DEFB107AQ8IZN7 70 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 PSD4Q8NDX1 1056 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 NFKBIDQ8NI38 313 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 PAQR8Q8TEZ7 354 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 TMEM19Q96HH6 336 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 C5orf34Q96MH7 638 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF583Q96ND8 569 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 HES7Q9BYE0 225 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 ZNF350Q9GZX5 532 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 SH2D2AQ9NP31 389 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 A4GALTQ9NPC4 353 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 NDE1Q9NXR1 346 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 ADA2Q9NZK5 511 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 MKLN1Q9UL63 735 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 WDR45Q9Y484 360 aa14.34□□□□□ -0.11
PCDHGC3-204ENST00000617222 MGAQ8IWI9 3026 aa14.33□□□□□ -0.11
PCDHGC3-204ENST00000617222 TRAV17A0A0B4J275 112 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 C5orf58C9J3I9 102 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 G3V3Y1 287 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 EBAG9O00559 213 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 NME4O00746 187 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZIC2O95409 532 aaPredicted RBP14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 P04436 131 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SP1P08047 785 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 LCN1P31025 176 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 HPCAP84074 193 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 LIPEQ05469 1076 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SCARB2Q14108 478 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 GNA13Q14344 377 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 FLYWCH1Q4VC44 716 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 PRAMEF20Q5VT98 475 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 BICRALQ6AI39 1079 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 FRRS1Q6ZNA5 592 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 Q6ZS92 163 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 IFNEQ86WN2 208 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZZZ3Q8IYH5 903 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 C11orf65Q8NCR3 313 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 GRHL3Q8TE85 626 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 WBP1Q96G27 269 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SECISBP2Q96T21 854 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 CDRT15Q96T59 188 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 HOXD1Q9GZZ0 328 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SLC25A18Q9H1K4 315 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 TMEM38AQ9H6F2 299 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 RUBCNLQ9H714 662 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 METTL7AQ9H8H3 244 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SPAG4Q9NPE6 437 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 POLE3Q9NRF9 147 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 UBQLN4Q9NRR5 601 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 SACM1LQ9NTJ5 587 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 TAS2R1Q9NYW7 299 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 CALML5Q9NZT1 146 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 CNIH4Q9P003 139 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 TMEM181Q9P2C4 612 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 GMPR2Q9P2T1 348 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 PACSIN3Q9UKS6 424 aa14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 CNOT11Q9UKZ1 510 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-204ENST00000617222 GUSBP08236 651 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 TBXA2RP21731 343 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 DCTP40126 519 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 CASP3P42574 277 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 CRISP3P54108 245 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ATP12AP54707 1039 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 EEFSECP57772 596 aaKnown RBP14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 RBBP4Q09028 425 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZNF169Q14929 603 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZNF630Q2M218 657 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 NADK2Q4G0N4 442 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 RPS26P11Q5JNZ5 115 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 GALNTL5Q7Z4T8 443 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 HMGN2P46Q86SG4 172 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 FBXW8Q8N3Y1 598 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 METTL25Q8N6Q8 603 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ZG16BQ96DA0 208 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 SCMH1Q96GD3 660 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 SPATA9Q9BWV2 254 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 SAP130Q9H0E3 1048 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 PROK2Q9HC23 129 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 KLRF1Q9NZS2 232 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 ABCD2Q9UBJ2 740 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 CFAP47Q6ZTR5 3102 aa14.32□□□□□ -0.12
PCDHGC3-204ENST00000617222 TNRC6AQ8NDV7 1962 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-204ENST00000617222 A0A0G2JPF8 293 aa14.31□□□□□ -0.12
PCDHGC3-204ENST00000617222 C2orf72A6NCS6 295 aa14.31□□□□□ -0.12
PCDHGC3-204ENST00000617222 PRAMEF25A6NGN4 478 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms