RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CLDN2P57739 230 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SNRPD1P62314 119 aaKnown RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
MSH6-214ENST00000616033 SREBF2Q12772 1141 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZFP82Q8N141 532 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 KRT78Q8N1N4 520 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ECHDC3Q96DC8 303 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 GAS2L1Q99501 681 aaPredicted RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 OSGEPL1Q9H4B0 414 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 DMRT3Q9NQL9 472 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SCN8AQ9UQD0 1980 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 LINC00587B1AMM8 73 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 DPM1O60762 260 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 LGI1O95970 557 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 H2AFB2P0C5Z0 115 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SLC6A1P30531 599 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 LCN1P31025 176 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 TRIM23P36406 574 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 PITPNBP48739 271 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 MAZP56270 477 aaKnown RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 CDKN3Q16667 212 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZNF600Q6ZNG1 722 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 DCAF4L2Q8NA75 395 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 OR6M1Q8NGM8 313 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 FANK1Q8TC84 345 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 HSD17B8Q92506 261 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ARHGAP9Q9BRR9 750 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 POLDIP3Q9BY77 421 aaKnown RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 AUNIPQ9H7T9 357 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZSCAN32Q9NX65 697 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SLCO1C1Q9NYB5 712 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 A4GNTQ9UNA3 340 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 CACNA1IQ9P0X4 2223 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 TTLL8A6PVC2 850 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 PGRMC2O15173 223 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SIX6O95475 246 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ACSM4P0C7M7 580 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 FAM157BP0CG42 384 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ACP5P13686 325 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 UQCRC2P22695 453 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 BLVRAP53004 296 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 UBE2MP61081 183 aaKnown RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 TRILQ7L0X0 811 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 FAM26EQ8N5C1 309 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZNF433Q8N7K0 673 aaPredicted RBP12.36□□□□□ -0.43
MSH6-214ENST00000616033 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 CYB5D2Q8WUJ1 264 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 LINC01599Q8WXQ3 324 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 TTC9Q92623 222 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 COL26A1Q96A83 441 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 A0A087WUU8 490 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 HMGN4O00479 90 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 CBX7O95931 251 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 TPOP07202 933 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 NPPBP16860 134 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 NUP62P37198 522 aaPredicted RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 RECQLP46063 649 aaPredicted RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 FNTBP49356 437 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 SNTB2Q13425 540 aaKnown RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 TPBGQ13641 420 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 SLC6A19Q695T7 634 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 RASGEF1AQ8N9B8 481 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 MOSPD2Q8NHP6 518 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PPA2Q9H2U2 334 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 TEX10Q9NXF1 929 aaPredicted RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 TESQ9UGI8 421 aaKnown RBP12.35□□□□□ -0.43
MSH6-214ENST00000616033 DSPPQ9NZW4 1301 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 E9PI62 339 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 GPR171O14626 319 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PI15O43692 258 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 B4GALT2O60909 372 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 ZNF254O75437 659 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 ATG12O94817 140 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 UCHL1P09936 223 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PSMB5P28074 263 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 PPP2R1BP30154 601 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 CLCNKAP51800 687 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 HCCSP53701 268 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 SP3Q02447 781 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 OCLNQ16625 522 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 LRFN4Q6PJG9 635 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 AMER3Q8N944 861 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 C16orf58Q96GQ5 468 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 GPR137Q96N19 417 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms