RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PABPC4LP0CB38 370 aaKnown RBP16.2■□□□□ 0.18
SREK1-216ENST00000612404 LIFP15018 202 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 IL7RP16871 459 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 CD247P20963 164 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 KRT20P35900 424 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 NRG3P56975 720 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 PLCXD2Q0VAA5 305 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 OR8K3Q8NH51 312 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 NUBPLQ8TB37 319 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 PROX1Q92786 737 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 HSPBAP1Q96EW2 488 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 SCNM1Q9BWG6 230 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 SAP130Q9H0E3 1048 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 MRTO4Q9UKD2 239 aaKnown RBP16.2■□□□□ 0.18
SREK1-216ENST00000612404 NINQ8N4C6 2090 aa16.2■□□□□ 0.18
SREK1-216ENST00000612404 HNRNPRO43390 633 aaKnown RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 REM1O75628 298 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 HPP00738 406 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 FESP07332 822 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 OR1E2P47887 323 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 KCNJ5P48544 419 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 KCNJ10P78508 379 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ATP1A4Q13733 1029 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 IFI44LQ53G44 452 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 PAPD5Q8NDF8 572 aaKnown RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 GPR32P1Q8NGA4 272 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 LRTOMTQ8WZ04 291 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 RSPO3Q9BXY4 272 aaPredicted RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 YY1AP1Q9H869 796 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 MMP25Q9NPA2 562 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ZNF232Q9UNY5 417 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 IFT52Q9Y366 437 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 CENPVL1A0A0U1RR11 272 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 AGAP5A6NIR3 686 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 TO15178 435 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ABCD3P28288 659 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 IL12BP29460 328 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 RNF144AP50876 292 aaPredicted RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 PSMD4P55036 377 aaKnown RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 PUM1Q14671 1186 aaKnown RBP eCLIP16.19■□□□□ 0.18
SREK1-216ENST00000612404 LARS2Q15031 903 aaKnown RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 TCTN3Q6NUS6 607 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ZDHHC21Q8IVQ6 265 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 SLC34A3Q8N130 599 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 PQLC1Q8N2U9 271 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ZNF614Q8N883 585 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ADOQ96SZ5 270 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 PKP2Q99959 881 aa16.19■□□□□ 0.18
SREK1-216ENST00000612404 ZNF443Q9Y2A4 671 aaPredicted RBP16.19■□□□□ 0.18
SREK1-216ENST00000612404 hCG_2039718K7EN88 272 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 UGT2B17O75795 530 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 IL33O95760 270 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 FABP3P05413 133 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 ICAM2P13598 275 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 SLC34A1Q06495 639 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 SNCBQ16143 134 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 MAPK14Q16539 360 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.18■□□□□ 0.18
SREK1-216ENST00000612404 TBC1D25Q3MII6 688 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 GEMIN6Q8WXD5 167 aaKnown RBP16.18■□□□□ 0.18
SREK1-216ENST00000612404 DIO2Q92813 273 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 PMM1Q92871 262 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 OMA1Q96E52 524 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 ZNF354BQ96LW1 612 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 PINK1Q9BXM7 581 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 MYOTQ9UBF9 498 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 KCNE5Q9UJ90 142 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 SLC13A4Q9UKG4 626 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 TMEM200CA6NKL6 621 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 SEMG1P04279 462 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 DBIP07108 87 aaKnown RBP16.18■□□□□ 0.18
SREK1-216ENST00000612404 DCTP40126 519 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 PDZK1Q5T2W1 519 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 IRAK1BP1Q5VVH5 260 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 TAGAPQ8N103 731 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 LILRA2Q8N149 483 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 ADAMTS17Q8TE56 1095 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 NAF1Q96HR8 494 aaKnown RBP16.18■□□□□ 0.18
SREK1-216ENST00000612404 SEMA6AQ9H2E6 1030 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 IL1RAPQ9NPH3 570 aa16.18■□□□□ 0.18
SREK1-216ENST00000612404 CLDN24A6NM45 220 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 GUSBP08236 651 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 FCGR1AP12314 374 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 HOXB6P17509 224 aaKnown RBP16.17■□□□□ 0.18
SREK1-216ENST00000612404 FASP25445 335 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 PRKAR1BP31321 381 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 VLDLRP98155 873 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 LIN52Q52LA3 116 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 AMIGO2Q86SJ2 522 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 VANGL1Q8TAA9 524 aaPredicted RBP16.17■□□□□ 0.18
SREK1-216ENST00000612404 RLIMQ9NVW2 624 aa16.17■□□□□ 0.18
SREK1-216ENST00000612404 C6orf203Q9P0P8 240 aaPredicted RBP16.17■□□□□ 0.18
SREK1-216ENST00000612404 OR2J2O76002 312 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 THBS1P07996 1170 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ITGAMP11215 1152 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 RPS4Y1P22090 263 aaKnown RBP16.16■□□□□ 0.18
SREK1-216ENST00000612404 PSPHP78330 225 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ZNF836Q6ZNA1 936 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ERMP1Q7Z2K6 904 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms