RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 RD3Q7Z3Z2 195 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 GDF7Q7Z4P5 450 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 PAQR7Q86WK9 346 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 OR4Q3Q8NH05 313 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 AP3S1Q92572 193 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 ELSPBP1Q96BH3 223 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 MS4A4EQ96PG1 132 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 MED18Q9BUE0 208 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 MIXL1Q9H2W2 232 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 SF3B6Q9Y3B4 125 aaKnown RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 SURF4O15260 269 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 HOXD12P35452 270 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 ATP6V1E1P36543 226 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 SLC1A3P43003 542 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 RFX2P48378 723 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 PUS10Q3MIT2 529 aaKnown RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 MFSD12Q6NUT3 480 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 XKRXQ6PP77 449 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 FRRS1Q6ZNA5 592 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 RAB43Q86YS6 212 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 SYT14Q8NB59 555 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 OR4F15Q8NGB8 312 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 TMEM255BQ8WV15 326 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 KATNB1Q9BVA0 655 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 SRMSQ9H3Y6 488 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 MTHFD2LQ9H903 347 aaPredicted RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 MOV10Q9HCE1 1003 aaKnown RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 IL20RAQ9UHF4 553 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 KLF15Q9UIH9 416 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 ZNF443Q9Y2A4 671 aaPredicted RBP16.1■□□□□ 0.17
NEK3-206ENST00000611833 WDR45Q9Y484 360 aa16.1■□□□□ 0.17
NEK3-206ENST00000611833 TRBV23OR9-2A0A075B6M9 112 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 PIP5K1CO60331 668 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 AGR2O95994 175 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 SLC35G6P0C7Q6 338 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 COL9A1P20849 921 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 NTSR1P30989 418 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 CD79BP40259 229 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 TNFRSF4P43489 277 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 HTR3AP46098 478 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 FABP5Q01469 135 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 GPR50Q13585 617 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 TMEM44Q2T9K0 475 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 GLYR1Q49A26 553 aaPredicted RBP16.09■□□□□ 0.17
NEK3-206ENST00000611833 NXNL2Q5VZ03 156 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 HEPHL1Q6MZM0 1159 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 CDC73Q6P1J9 531 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 TMEM53Q6P2H8 277 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 MBOAT2Q6ZWT7 520 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 OR4N5Q8IXE1 308 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 PEX5LQ8IYB4 626 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 OR4K14Q8NGD5 310 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 ZCCHC10Q8TBK6 192 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 OR1E3Q8WZA6 343 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 C10orf90Q96M02 699 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 CTRCQ99895 268 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 IL20Q9NYY1 176 aa16.09■□□□□ 0.17
NEK3-206ENST00000611833 H2AFY2Q9P0M6 372 aaPredicted RBP16.09■□□□□ 0.17
NEK3-206ENST00000611833 CASKO14936 926 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 OR5F1O95221 314 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 GSTT2P0CG29 244 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 GSTT2BP0CG30 244 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 PTNP21246 168 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 TNFRSF17Q02223 184 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 DSG2Q14126 1118 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 ENPP7Q6UWV6 458 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 POGLUT1Q8NBL1 392 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 CCL4L1Q8NHW4 92 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 OTULINQ96BN8 352 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 NEK6Q9HC98 313 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 NLGN3Q9NZ94 848 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 ZNF624Q9P2J8 865 aaPredicted RBP16.08■□□□□ 0.17
NEK3-206ENST00000611833 ZNF221Q9UK13 617 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 SLC7A7Q9UM01 511 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 CA5BQ9Y2D0 317 aa16.08■□□□□ 0.17
NEK3-206ENST00000611833 A0A1W2PQF6 199 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 H0Y8X5 98 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 THY1P04216 161 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 LAMP2P13473 410 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 NDUFS1P28331 727 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 SOX18P35713 384 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 SIM1P81133 766 aaPredicted RBP16.08■□□□□ 0.16
NEK3-206ENST00000611833 PGGHGQ32M88 737 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 DEFB134Q4QY38 66 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 PYDC2Q56P42 97 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 AADACL4Q5VUY2 407 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 SAMD14Q8IZD0 417 aaPredicted RBP16.08■□□□□ 0.16
NEK3-206ENST00000611833 FAM181AQ8N9Y4 354 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 CAPSLQ8WWF8 208 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 GABRG3Q99928 467 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 TBC1D17Q9HA65 648 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 PHF11Q9UIL8 331 aa16.08■□□□□ 0.16
NEK3-206ENST00000611833 EPOPA6NHQ4 379 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 FGF9P31371 208 aaPredicted RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 CAV3P56539 151 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SUZ12Q15022 739 aaKnown RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 ZNF836Q6ZNA1 936 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms