RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TMBIM1Q969X1 311 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ELP4Q96EB1 424 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ZNF764Q96H86 408 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 PPP1R36Q96LQ0 422 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ANGPTL4Q9BY76 406 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 ZNF703Q9H7S9 590 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 METTL7AQ9H8H3 244 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 TMBIM4Q9HC24 238 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 C19orf53Q9UNZ5 99 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-208ENST00000608287 RAP2CQ9Y3L5 183 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 LIPGQ9Y5X9 500 aa17.51■□□□□ 0.39
SGMS1-208ENST00000608287 TRGV5A0A0B4J1U4 118 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 UPK1AO00322 258 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 PLOD2O00469 737 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 TO15178 435 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 TBX19O60806 448 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 SMPD2O60906 423 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 REM1O75628 298 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 SNUPNO95149 360 aaKnown RBP17.5■□□□□ 0.39
SGMS1-208ENST00000608287 SNX4O95219 450 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 RFPL3SP0C7P2 107 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 KRT20P35900 424 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 HPCAL1P37235 193 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 MASP1P48740 699 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 PDE7AQ13946 482 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 CASP8Q14790 479 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 NPSR1Q6W5P4 371 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 R3HCC1LQ7Z5L2 792 aaKnown RBP17.5■□□□□ 0.39
SGMS1-208ENST00000608287 PACS2Q86VP3 889 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 SLC44A2Q8IWA5 706 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-208ENST00000608287 ZFP28Q8NHY6 868 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 HGDQ93099 445 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 MTERF3Q96E29 417 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-208ENST00000608287 OR10H1Q9Y4A9 318 aa17.5■□□□□ 0.39
SGMS1-208ENST00000608287 ARID1AO14497 2285 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 INAFM1C9JVW0 142 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 UGT2B11O75310 529 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 TRIM3O75382 744 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 PRPS2P11908 318 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 DDX5P17844 614 aaKnown RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 GDF1P27539 372 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 IL12BP29460 328 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 RPL14P50914 215 aaKnown RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 MANFP55145 182 aaKnown RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 IL23RQ5VWK5 629 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 OR2L13Q8N349 312 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 RELL2Q8NC24 303 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 SMPDL3BQ92485 455 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 COL21A1Q96P44 957 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 NODALQ96S42 347 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 SORT1Q99523 831 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 KLRF1Q9NZS2 232 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
SGMS1-208ENST00000608287 NCKAP5O14513 1909 aa17.49■□□□□ 0.39
SGMS1-208ENST00000608287 OR6C70A6NIJ9 312 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 SCAMP2O15127 329 aaKnown RBP17.48■□□□□ 0.39
SGMS1-208ENST00000608287 IL2RAP01589 272 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 TIMP3P35625 211 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 RPL3P39023 403 aaKnown RBP17.48■□□□□ 0.39
SGMS1-208ENST00000608287 WDR4P57081 412 aaKnown RBP17.48■□□□□ 0.39
SGMS1-208ENST00000608287 PSPHP78330 225 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 BST1Q10588 318 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 MAD2L1Q13257 205 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-208ENST00000608287 PTGR1Q14914 329 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 CXorf67Q86X51 503 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-208ENST00000608287 LACC1Q8IV20 430 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 OR7A2PQ8NGA2 310 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 OR4N2Q8NGD1 307 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 TLCD1Q96CP7 247 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 TMCO6Q96DC7 493 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 ADOQ96SZ5 270 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 OSBPL11Q9BXB4 747 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 QPCTLQ9NXS2 382 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 ATP6V1HQ9UI12 483 aa17.48■□□□□ 0.39
SGMS1-208ENST00000608287 PRAMEF25A6NGN4 478 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 AHRRA9YTQ3 701 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 GNB5O14775 395 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 TSPAN2O60636 221 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 ABCB7O75027 752 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 EFNA1P20827 205 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 FRKP42685 505 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 PSG6Q00889 435 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 ZNHIT3Q15649 155 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 SLC30A6Q6NXT4 461 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 TMEM81Q6P7N7 255 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 LARP4Q71RC2 724 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 SZRD1Q7Z422 152 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 ULK2Q8IYT8 1036 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 KIRREL3Q8IZU9 778 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 SLC35A4Q96G79 324 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 TMEM41AQ96HV5 264 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 Q96MF0 132 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 GNRHR2Q96P88 292 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 GALNT9Q9HCQ5 603 aa17.47■□□□□ 0.39
SGMS1-208ENST00000608287 EQTNQ9NQ60 294 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms