RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 LRRC30A6NM36 301 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 ANKRD30BLA7E2S9 258 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 P0C879 139 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 GSTT2P0CG29 244 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 GSTT2BP0CG30 244 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 KLK2P20151 261 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 IGHV1-2P23083 117 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 ACVR1BP36896 505 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 PTGFRP43088 359 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 XCR1P46094 333 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 LIM2P55344 173 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 GMFBP60983 142 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 NDPQ00604 133 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 IL9RQ01113 521 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 PUDPQ08623 228 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 DPYSQ14117 519 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 CAMK4Q16566 473 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 GSG1Q2KHT4 349 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 C12orf60Q5U649 245 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 C2orf66Q6UXQ4 117 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZSCAN30Q86W11 494 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 C11orf53Q8IXP5 236 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 EFCAB13Q8IY85 973 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 CCDC26Q8TAB7 109 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 SELENOMQ8WWX9 145 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 VSTM2LQ96N03 204 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 CASD1Q96PB1 797 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 DPH7Q9BTV6 452 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 MRPL13Q9BYD1 178 aaKnown RBP2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 SLC25A51Q9H1U9 297 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 LPAR2Q9HBW0 351 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 VAT1LQ9HCJ6 419 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 C1orf123Q9NWV4 160 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 VNN3Q9NY84 501 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 HOOK1Q9UJC3 728 aaKnown RBP2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 MGAT4BQ9UQ53 548 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 L3MBTL1Q9Y468 752 aa2.82□□□□□ -1.96
RNU6-88P-201ENST00000606801 PRRC2AP48634 2157 aaKnown RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 KLF18A0A0U1RQI7 1052 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 A0A1B0GUL7 405 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ESYT2A0FGR8 921 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 CASKO14936 926 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 EFNA2O43921 213 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 VPS26AO75436 327 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 AKR7A3O95154 331 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 TRIM16O95361 564 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 PAICSP22234 425 aaKnown RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 PTBP1P26599 531 aaKnown RBP eCLIP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 DPP4P27487 766 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 IGLV3-21P80748 117 aaPredicted RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 HTD2P86397 168 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 PLOD1Q02809 727 aaPredicted RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 HSF2Q03933 536 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 PDZK1IP1Q13113 114 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 INAQ16352 499 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 CYP51A1Q16850 503 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 QRICH1Q2TAL8 776 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 LINC01620Q4KN68 170 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 SBK1Q52WX2 424 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 C9orf129Q5T035 196 aaKnown RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 SLX4IPQ5VYV7 408 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ERICH1Q86X53 443 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 CBWD2Q8IUF1 395 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZBED8Q8IZ13 594 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 BPIFB2Q8N4F0 458 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZNF525Q8N782 197 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 GPATCH11Q8N954 259 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ANKRD20A12PQ8NF67 263 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ELOVL4Q9GZR5 314 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 COMMD4Q9H0A8 199 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 CALHM2Q9HA72 323 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZNF275Q9NSD4 429 aaPredicted RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 TAS2R3Q9NYW6 316 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 EHFQ9NZC4 300 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 MTF2Q9Y483 593 aaPredicted RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 USP16Q9Y5T5 823 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 CCDC7Q96M83 1385 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
RNU6-88P-201ENST00000606801 ATP8B3O60423 1300 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 RGSL1A5PLK6 1076 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 OR4F21O95013 312 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 ARF4P18085 180 aaPredicted RBP2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZNF154Q13106 437 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 TRIP10Q15642 601 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 GLYR1Q49A26 553 aaPredicted RBP2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 CATSPER4Q7RTX7 472 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 HSD11B1LQ7Z5J1 315 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 ZNF677Q86XU0 584 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 MISPQ8IVT2 679 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 UBQLNLQ8IYU4 475 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 GCNT2Q8N0V5 402 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 CSNK1A1LQ8N752 337 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 OR13F1Q8NGS4 319 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 GIPC3Q8TF64 312 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 UPRTQ96BW1 309 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 DHTKD1Q96HY7 919 aaPredicted RBP2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 OR5M11Q96RB7 305 aa2.8□□□□□ -1.96
RNU6-88P-201ENST00000606801 RHOJQ9H4E5 214 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms