RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 OR10A3P58181 314 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 CRYZQ08257 329 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 PGGHGQ32M88 737 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 RNASE12Q5GAN4 147 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 TRMT11Q7Z4G4 463 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 FAM129CQ86XR2 697 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SIAH3Q8IW03 269 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 GJD3Q8N144 294 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 BEST4Q8NFU0 473 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 OR2A12Q8NGT7 310 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SETD7Q8WTS6 366 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 ERMAPQ96PL5 475 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 GSX2Q9BZM3 304 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 B3GNT4Q9C0J1 378 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 BCL2L10Q9HD36 194 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 RDH8Q9NYR8 311 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 CSNK1G3Q9Y6M4 447 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 KIAA1549LQ6ZVL6 1849 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 A0A1W2PPL8 197 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 CPSF4LA6NMK7 179 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SOCS6O14544 535 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SLC9A3R1O14745 358 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 HOXA2O43364 376 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 FGBP02675 491 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 PAICSP22234 425 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 CCR6P51684 374 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 RAG2P55895 527 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 VSX2P58304 361 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 ZNF658BQ4V348 819 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 C2orf73Q8N5S3 287 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 MS4A15Q8N5U1 240 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 NR4A3Q92570 626 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 YIPF5Q969M3 257 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 ALG8Q9BVK2 526 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SPRTNQ9H040 489 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 TEX10Q9NXF1 929 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SLC13A4Q9UKG4 626 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-205ENST00000597304 SLC9B1P1A6NJY1 282 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 LEFTY1O75610 366 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 NTN1O95631 604 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 LCN1P31025 176 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 STAT5AP42229 794 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 PRKAG1P54619 331 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 RPL6Q02878 288 aaKnown RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 ST3GAL3Q11203 375 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 GNA13Q14344 377 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 LCTLQ6UWM7 567 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 BTN2A1Q7KYR7 527 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 NUDT13Q86X67 352 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 ACBD7Q8N6N7 88 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 OR2T35Q8NGX2 323 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 RPLP0P6Q8NHW5 317 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 IL17FQ96PD4 163 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 RBCK1Q9BYM8 510 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 QRSL1Q9H0R6 528 aaKnown RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 TRIM36Q9NQ86 728 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 SEMA4GQ9NTN9 838 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 TUBAL3A6NHL2 446 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 WASH3PC4AMC7 463 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 SLC2A10O95528 541 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 HOXD4P09016 255 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 FPR3P25089 353 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 GPR4P46093 362 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 ANXA11P50995 505 aaKnown RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 FUT5Q11128 374 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 MLC1Q15049 377 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 PIP5KL1Q5T9C9 394 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 GARNL3Q5VVW2 1013 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 FTMTQ8N4E7 242 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 BMPERQ8N8U9 685 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 GLIPR2Q9H4G4 154 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 HINT3Q9NQE9 182 aaKnown RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 MRPL17Q9NRX2 175 aaKnown RBP11.78□□□□□ -0.52
ZNF558-205ENST00000597304 IL20Q9NYY1 176 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 SPG21Q9NZD8 308 aa11.78□□□□□ -0.52
ZNF558-205ENST00000597304 A0A0G2JPF8 293 aa11.77□□□□□ -0.52
ZNF558-205ENST00000597304 HNRNPCL2B2RXH8 293 aa11.77□□□□□ -0.52
ZNF558-205ENST00000597304 HNRNPCL3B7ZW38 293 aa11.77□□□□□ -0.52
ZNF558-205ENST00000597304 KHNYNO15037 678 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms