RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NDUFV2P19404 249 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 AHCYP23526 432 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ACSL1P33121 698 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 TLE2Q04725 743 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CSTF1Q05048 431 aaKnown RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 MAP4K2Q12851 820 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CEBPEQ15744 281 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ZBTB37Q5TC79 503 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CD276Q5ZPR3 534 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 SLC30A6Q6NXT4 461 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ZNF793Q6ZN11 406 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ANKRD33Q7Z3H0 272 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CDH24Q86UP0 819 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ACBD7Q8N6N7 88 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 LRRC17Q8N6Y2 441 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 BRIX1Q8TDN6 353 aaKnown RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 OR8D1Q8WZ84 308 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 DHRS9Q9BPW9 319 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 THAP7Q9BT49 309 aaPredicted RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 MED28Q9H204 178 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CTPS2Q9NRF8 586 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
VRK3-209ENST00000594948 SATB2Q9UPW6 733 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 STON1Q9Y6Q2 735 aa12.39□□□□□ -0.43
VRK3-209ENST00000594948 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 TEX51A0A1B0GUA7 166 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 C2orf92A0A1B0GVN3 265 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ICMTO60725 284 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ALPPL2P10696 532 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ADRB3P13945 408 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 CSNK2A2P19784 350 aaPredicted RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 THBS2P35442 1172 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 TSFMP43897 325 aaKnown RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 PITPNBP48739 271 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 PRKAG1P54619 331 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 RAG2P55895 527 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 TGM3Q08188 693 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 CLEC12AQ5QGZ9 265 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 IDNKQ5T6J7 187 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 RFPL4BQ6ZWI9 263 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 RTL10Q7L3V2 364 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 OLIG3Q7RTU3 272 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 TCEAL4Q96EI5 215 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 OR2M2Q96R28 347 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 GFM1Q96RP9 751 aaKnown RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 C17orf62Q9BQA9 187 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 AICDAQ9GZX7 198 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 HINT3Q9NQE9 182 aaKnown RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 ENAMQ9NRM1 1142 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 ZNF275Q9NSD4 429 aaPredicted RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 IMP3Q9NV31 184 aaKnown RBP12.38□□□□□ -0.43
VRK3-209ENST00000594948 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 HCFC1R1Q9NWW0 138 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 TEKT2Q9UIF3 430 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 NUBP2Q9Y5Y2 271 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 WNT6Q9Y6F9 365 aa12.38□□□□□ -0.43
VRK3-209ENST00000594948 A0A0A6YYJ9 748 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 A0A1W2PQ72 361 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 LEUTXA8MZ59 168 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 AGR2O95994 175 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 STOMP27105 288 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PSMB5P28074 263 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 CA8P35219 290 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ATP6V1E1P36543 226 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 TAS2R43P59537 309 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 SNRPD2P62316 118 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 MLLT1Q03111 559 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 PRDX1Q06830 199 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 HEPHL1Q6MZM0 1159 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 CXXC5Q7LFL8 322 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 GDF7Q7Z4P5 450 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 NUP43Q8NFH3 380 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 GANCQ8TET4 914 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 CNRIP1Q96F85 164 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 SLC41A3Q96GZ6 507 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 YIPF4Q9BSR8 244 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ABCG5Q9H222 651 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 DPAGT1Q9H3H5 408 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms