RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 PDPK1O15530 556 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 FADS1O60427 444 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TBX19O60806 448 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ATE1O95260 518 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 HEXAP06865 529 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 LINC00032P0C843 101 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 EVI2BP34910 448 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 KIR2DL3P43628 341 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ASCL1P50553 236 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 RPL38P63173 70 aaKnown RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 IFFO1Q0D2I5 559 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 GAB1Q13480 694 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 PDE7AQ13946 482 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 RCAN2Q14206 197 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 DEFB113Q30KQ7 82 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 UGT3A2Q3SY77 523 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 RFTN2Q52LD8 501 aaPredicted RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ZNF385BQ569K4 471 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 SH2D4BQ5SQS7 431 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 WDR93Q6P2C0 686 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 EMBQ6PCB8 327 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ENPP6Q6UWR7 440 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 CLEC9AQ6UXN8 241 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ZNF551Q7Z340 670 aaPredicted RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ADGRE4PQ86SQ3 457 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TRIM42Q8IWZ5 723 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TCP10LQ8TDR4 215 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 GFM2Q969S9 779 aaKnown RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TSSK3Q96PN8 268 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TRIB1Q96RU8 372 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 SH3GL2Q99962 352 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 LMF2Q9BU23 707 aaKnown RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 MECRQ9BV79 373 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
H3F3B-213ENST00000593254 REEP4Q9H6H4 257 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 Q9N2J8 555 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 CRIM1Q9NZV1 1036 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 CBLCQ9ULV8 474 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 ABCG2Q9UNQ0 655 aa11.97□□□□□ -0.49
H3F3B-213ENST00000593254 TTC36A6NLP5 189 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 C17orf51A8MQB3 221 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 SYT5O00445 386 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 SPAG7O75391 227 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 IL33O95760 270 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 NUDT7P0C024 238 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 ADSLP30566 484 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 PEX19P40855 299 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 FRKP42685 505 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 LHX2P50458 406 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 HSPB3Q12988 150 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 SNTB1Q13884 538 aaKnown RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 ZNHIT3Q15649 155 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 DECR1Q16698 335 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 OR5M10Q6IEU7 315 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 ANKRD26P1Q6NSI1 321 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 AAGABQ6PD74 315 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 FADS6Q8N9I5 356 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 C9orf106Q8NAJ2 232 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 GOT1L1Q8NHS2 421 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 TWIST2Q8WVJ9 160 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 HOXB13Q92826 284 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 CAVIN3Q969G5 261 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 CIDECQ96AQ7 238 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 PPCDCQ96CD2 204 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 ZBED6CLQ96FA7 236 aaPredicted RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 UCN2Q96RP3 112 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 TUBA1CQ9BQE3 449 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 EML4Q9HC35 981 aaKnown RBP11.96□□□□□ -0.49
H3F3B-213ENST00000593254 DKKL1Q9UK85 242 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 TRAF6Q9Y4K3 522 aa11.96□□□□□ -0.49
H3F3B-213ENST00000593254 H0Y3Z8 333 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 AKAP10O43572 662 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 SCO2O43819 266 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ZIC3O60481 467 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 IL18BPO95998 194 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 RAF1P04049 648 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 PRPS2P11908 318 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 BCKDHAP12694 445 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ZNF708P17019 499 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 CHMP24386 653 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 CTSSP25774 331 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 DPP4P27487 766 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 UQCRC1P31930 480 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ARRB2P32121 409 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 SERPINB5P36952 375 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 MAP3K8P41279 467 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ASMTP46597 345 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 PSMD4P55036 377 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 DSCR4P56555 118 aaPredicted RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 CLDN18P56856 261 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.55e-9■□□□□ 8.3
H3F3B-213ENST00000593254 GALNTL6Q49A17 601 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 XKR7Q5GH72 579 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ZCCHC23Q6ZST2 131 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 CXXC5Q7LFL8 322 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 DDIASQ8IXT1 998 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms