RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ZNHIT3Q15649 155 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 SLC25A35Q3KQZ1 300 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MFSD12Q6NUT3 480 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 TRIM42Q8IWZ5 723 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 KRTCAP2Q8N6L1 136 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 CDRT4Q8N9R6 151 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 SLC16A11Q8NCK7 471 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MBD3L2Q8NHZ7 208 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 PSMA8Q8TAA3 256 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 ZPLD1Q8TCW7 415 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 FAM120BQ96EK7 910 aaKnown RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 C16orf58Q96GQ5 468 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 LURAP1Q96LR2 239 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 TUBA1CQ9BQE3 449 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 FAM120CQ9NX05 1096 aaKnown RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 HSPB2A8KAH6 182 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 EMC8O43402 210 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 UTS2O95399 124 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 HSPA4LO95757 839 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 SSTR2P30874 369 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 HPCAL1P37235 193 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 STARP49675 285 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 PRKAG1P54619 331 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 C21orf58P58505 322 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 HSPB2Q16082 182 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 DUSP5Q16690 384 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 ZAR1Q86SH2 424 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 IFNEQ86WN2 208 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 FNDC5Q8NAU1 212 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 TUBGCP3Q96CW5 907 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 RMND5BQ96G75 393 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-239ENST00000592467 MS4A4EQ96PG1 132 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 UCN2Q96RP3 112 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 TRIB1Q96RU8 372 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 DSN1Q9H410 356 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 CALHM2Q9HA72 323 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 ASIC5Q9NY37 505 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 RAP2CQ9Y3L5 183 aa18.29■□□□□ 0.52
CIRBP-239ENST00000592467 MED12LQ86YW9 2145 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 IGLV3-32A0A0A0MS00 114 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 A0A1W2PRB8 838 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 ZWINTO95229 277 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 G6PDP11413 515 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 ZNF708P17019 499 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 BGNP21810 368 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 CHMP24386 653 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 DPP4P27487 766 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 RPL3P39023 403 aaKnown RBP18.28■□□□□ 0.52
CIRBP-239ENST00000592467 DSCR4P56555 118 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-239ENST00000592467 CLDN18P56856 261 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 PRR5P85299 388 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 EMX2Q04743 252 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 GRAMD1BQ3KR37 738 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 MARCH3Q86UD3 253 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 C9orf106Q8NAJ2 232 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 FBXO30Q8TB52 745 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 GPR151Q8TDV0 419 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 SH3GL2Q99962 352 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 C3orf14Q9HBI5 128 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 FBXO34Q9NWN3 711 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 MED11Q9P086 117 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 PPP4R1LQ9P1A2 415 aa18.28■□□□□ 0.52
CIRBP-239ENST00000592467 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-239ENST00000592467 POLQO75417 2590 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 KCNK2O95069 426 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 SLC1A6P48664 564 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 DIO3P55073 304 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CLDN15P56746 228 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 WDR4P57081 412 aaKnown RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 PDCD2Q16342 344 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 SMU1Q2TAY7 513 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 ZCCHC12Q6PEW1 402 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 PLXDC2Q6UX71 529 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CAMKMTQ7Z624 323 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 GALNT10Q86SR1 603 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 OR4C3Q8NH37 302 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 PPP1R14CQ8TAE6 165 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 DUSP19Q8WTR2 217 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 OR5P2Q8WZ92 322 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 SLC9A6Q92581 669 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 OTUB1Q96FW1 271 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CENPHQ9H3R5 247 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CXorf36Q9H7Y0 433 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 AKTIPQ9H8T0 292 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 CLCF1Q9UBD9 225 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 ZNF629Q9UEG4 869 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 MRTO4Q9UKD2 239 aaKnown RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 RPH3AQ9Y2J0 694 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-239ENST00000592467 L3MBTL1Q9Y468 752 aa18.27■□□□□ 0.52
CIRBP-239ENST00000592467 KCNH1O95259 989 aa18.26■□□□□ 0.51
CIRBP-239ENST00000592467 HMGN2P05204 90 aaKnown RBP18.26■□□□□ 0.51
CIRBP-239ENST00000592467 NGFRP08138 427 aa18.26■□□□□ 0.51
CIRBP-239ENST00000592467 PRPS1L1P21108 318 aa18.26■□□□□ 0.51
CIRBP-239ENST00000592467 RFX3P48380 749 aa18.26■□□□□ 0.51
CIRBP-239ENST00000592467 PSMD4P55036 377 aaKnown RBP18.26■□□□□ 0.51
CIRBP-239ENST00000592467 CLDN8P56748 225 aa18.26■□□□□ 0.51
CIRBP-239ENST00000592467 SF3B4Q15427 424 aaKnown RBP eCLIP18.26■□□□□ 0.51
CIRBP-239ENST00000592467 FBXL19-AS1Q494R0 122 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms