RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OSBPL11Q9BXB4 747 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SLC6A15Q9H2J7 730 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 TP63Q9H3D4 680 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 METTL7AQ9H8H3 244 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 GALNT9Q9HCQ5 603 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SRA1Q9HD15 236 aaKnown RBP10.23□□□□□ -0.77
SMAD4-211ENST00000590499 PNPLA3Q9NST1 481 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 SH3BP4Q9P0V3 963 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 B4GALT7Q9UBV7 327 aa10.23□□□□□ -0.77
SMAD4-211ENST00000590499 APCP25054 2843 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 LRBAP50851 2863 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 FBN2P35556 2912 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 TRGV5A0A0B4J1U4 118 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 B4DXG7 233 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 BCKDKO14874 412 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 ICOSLGO75144 302 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 SNNO75324 88 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 REM1O75628 298 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 LAMP1P11279 417 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 G6PDP11413 515 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 ELAVL4P26378 380 aaKnown RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 GDF1P27539 372 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 HPCAL1P37235 193 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 RPL3P39023 403 aaKnown RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 MAN2A2P49641 1150 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 RPL14P50914 215 aaKnown RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 PNLIPRP2P54317 469 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 GAS1P54826 345 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 EMX2Q04743 252 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 STX3Q13277 289 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 EFR3AQ14156 821 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 CYP27C1Q4G0S4 372 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 GXYLT1Q4G148 440 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 EXOSC6Q5RKV6 272 aaKnown RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 HHATQ5VTY9 493 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 XKRXQ6PP77 449 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 ANGPTL8Q6UXH0 198 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 WDR53Q7Z5U6 358 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 KIRREL3Q8IZU9 778 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 RPRMLQ8N4K4 120 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 KRTCAP2Q8N6L1 136 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 WDSUB1Q8N9V3 476 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 NEIL3Q8TAT5 605 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 COQ8BQ96D53 544 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 GNRHR2Q96P88 292 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 ADOQ96SZ5 270 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 AKTIPQ9H8T0 292 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 SIRT3Q9NTG7 399 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 TNFRSF10DQ9UBN6 386 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 FAM215AQ9Y5M1 114 aa10.22□□□□□ -0.77
SMAD4-211ENST00000590499 KLF2Q9Y5W3 355 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
SMAD4-211ENST00000590499 TTC36A6NLP5 189 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 CYP4B1P13584 511 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 EFNA1P20827 205 aaPredicted RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 PRPS1L1P21108 318 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 IL12BP29460 328 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 DCTP40126 519 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MASP1P48740 699 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 SMSP52788 366 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MANFP55145 182 aaKnown RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 CRYZQ08257 329 aaKnown RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MAD2L1Q13257 205 aaPredicted RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 GAB1Q13480 694 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 RTL6Q6ICC9 239 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 CAMKMTQ7Z624 323 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 LRRC34Q8IZ02 419 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 EID3Q8N140 333 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 OR5M9Q8NGP3 310 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 PSMA8Q8TAA3 256 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 ARL8AQ96BM9 186 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 SARAFQ96BY9 339 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 EFHD2Q96C19 240 aaPredicted RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 TMCO6Q96DC7 493 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MEGF10Q96KG7 1140 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 PAIP2Q9BPZ3 127 aaKnown RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MRPL18Q9H0U6 180 aaKnown RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 LDAHQ9H6V9 325 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 MEAF6Q9HAF1 191 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 PNPOQ9NVS9 261 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 KLRF1Q9NZS2 232 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 CBLCQ9ULV8 474 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 EIF3LQ9Y262 564 aaKnown RBP10.21□□□□□ -0.77
SMAD4-211ENST00000590499 OR10H1Q9Y4A9 318 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 PCDHGB3Q9Y5G1 929 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 WIF1Q9Y5W5 379 aa10.21□□□□□ -0.77
SMAD4-211ENST00000590499 ANKRD28O15084 1053 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 FADS1O60427 444 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 WDR1O75083 606 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 NKX2-2O95096 273 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 TACC2O95359 2948 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 IL33O95760 270 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 IGKV1D-16P01601 117 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 ACP2P11117 423 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 DDX5P17844 614 aaKnown RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 ACVR2AP27037 513 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 EVI2BP34910 448 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms