RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 NANOGNBQ7Z5D8 188 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 SYNPOQ8N3V7 929 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 SLC30A2Q9BRI3 323 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 SEC61A2Q9H9S3 476 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 C1GALT1Q9NS00 363 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 AKAP7Q9P0M2 348 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 A0A1W2PS29 197 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 C12orf71A8MTZ7 269 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 NR0B1P51843 470 aaKnown RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 RAE1P78406 368 aaKnown RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 REEP5Q00765 189 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 KEAP1Q14145 624 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 ETFBKMTQ8IXQ9 262 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 MS4A4EQ96PG1 132 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 PCYT1BQ9Y5K3 369 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 IRGMA1A4Y4 181 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 HNRNPKP61978 463 aaKnown RBP eCLIP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 LSRQ86X29 649 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 RAB43Q86YS6 212 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 ELP4Q96EB1 424 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 ZDHHC12Q96GR4 267 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 GPN3Q9UHW5 284 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-208ENST00000589797 PMF1-BGLAPU3KQ54 211 aa13.67□□□□□ -0.22
RETREG3-208ENST00000589797 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SSNA1O43805 119 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 CCKBRP32239 447 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 PSMD4P55036 377 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 OC90Q02509 493 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 HYAL4Q2M3T9 481 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SLC29A4Q7RTT9 530 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 DSN1Q9H410 356 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 TMEM185BQ9H7F4 350 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 DDX31Q9H8H2 851 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 KLRF1Q9NZS2 232 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ERVK-11Q9UQG0 969 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 CCL27Q9Y4X3 112 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 UNC119BA6NIH7 251 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 CD38P28907 300 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 GNALP38405 381 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 APOFQ13790 326 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 KDM4DQ6B0I6 523 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 PLAG1Q6DJT9 500 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ZNF544Q6NX49 715 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 OR10H5Q8NGA6 315 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 FNDC8Q8TC99 324 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 HCAR2Q8TDS4 363 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ACER3Q9NUN7 267 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 LRIT1Q9P2V4 623 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ENPP5Q9UJA9 477 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 KCNE3Q9Y6H6 103 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 MGAMO43451 1857 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SH3PXD2BA1X283 911 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 HMGN4O00479 90 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NPC1O15118 1278 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NARSO43776 548 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 GPR75O95800 540 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 RCVRNP35243 200 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 BSGP35613 385 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 LIPAP38571 399 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NKX2-5P52952 324 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ZNF91Q05481 1191 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NDUFAF6Q330K2 333 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 DCST2Q5T1A1 773 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 MTFR2Q6P444 385 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 LAS2Q8IYD9 372 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 MOAP1Q96BY2 351 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 DOCK8Q8NF50 2099 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 A0A0J9YY10 115 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 C17orf105B2RV13 164 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 RLN1P04808 185 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SLC2A2P11168 524 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ALDH3B2P48448 385 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 MAN2A2P49641 1150 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SRSF5Q13243 272 aaKnown RBP13.66□□□□□ -0.22
RETREG3-208ENST00000589797 ACBD7Q8N6N7 88 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 SDR9C7Q8NEX9 313 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 C1QTNF2Q9BXJ5 285 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 TMEM138Q9NPI0 162 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 NECTIN3Q9NQS3 549 aa13.66□□□□□ -0.22
RETREG3-208ENST00000589797 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 SAGE2PA6NJ88 616 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms