RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GPR68Q15743 365 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 ST3GAL2Q16842 350 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 FLYWCH1Q4VC44 716 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 RPS26P11Q5JNZ5 115 aaPredicted RBP13.96□□□□□ -0.17
ATG4D-211ENST00000589753 PRAMEF8Q5VWM4 474 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 PRAMEF7Q5VXH5 474 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 DESI1Q6ICB0 168 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TYW3Q6IPR3 259 aaKnown RBP13.96□□□□□ -0.17
ATG4D-211ENST00000589753 REEP3Q6NUK4 255 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 FRRS1Q6ZNA5 592 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 HIPK4Q8NE63 616 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TNIP2Q8NFZ5 429 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 OR10G3Q8NGC4 313 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 BBS10Q8TAM1 723 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 HAS2Q92819 552 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 HGDQ93099 445 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TMCO6Q96DC7 493 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 SGCZQ96LD1 299 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TREX2Q9BQ50 279 aaPredicted RBP13.96□□□□□ -0.17
ATG4D-211ENST00000589753 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 HOXD1Q9GZZ0 328 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 SAP130Q9H0E3 1048 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 SLC38A1Q9H2H9 487 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TRIM45Q9H8W5 580 aaPredicted RBP13.96□□□□□ -0.17
ATG4D-211ENST00000589753 BCL2L10Q9HD36 194 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 LRFN1Q9P244 771 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 MKLN1Q9UL63 735 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 PCDHGB7Q9Y5F8 929 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 DMXL2Q8TDJ6 3036 aa13.96□□□□□ -0.18
ATG4D-211ENST00000589753 CELSR3Q9NYQ7 3312 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 OR5H15A6NDH6 313 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 HNRNPCL2B2RXH8 293 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 GSTA4O15217 222 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 GSC2O15499 205 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 KIAA0513O60268 411 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 ICOSLGO75144 302 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 PGM3O95394 542 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 UTS2O95399 124 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 ZIC2O95409 532 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 TCN1P20061 433 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 HTR1EP28566 365 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 PGM1P36871 562 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 RPP38P78345 283 aaKnown RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 VEZF1Q14119 521 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 COL28A1Q2UY09 1125 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 LINC00303Q3SY05 128 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 INTS11Q5TA45 600 aaKnown RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 RTL4Q6ZR62 310 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF619Q8N2I2 560 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 GOLM1Q8NBJ4 401 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 FAM156AQ8NDB6 213 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 TTC9Q92623 222 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 PMM1Q92871 262 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-211ENST00000589753 PCDHGA10Q9Y5H3 936 aa13.95□□□□□ -0.18
ATG4D-211ENST00000589753 DSPPQ9NZW4 1301 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 ZFHX4Q86UP3 3567 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 NPIPA5A0A0B4J1W7 369 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 NPIPA7E9PJI5 369 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 PDE5AO76074 875 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 NPIPA8P0DM63 369 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 ME2P23368 584 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 AQP1P29972 269 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 DCTP40126 519 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 RHDQ02161 417 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 KCNAB2Q13303 367 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 OR1C1Q15619 314 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SLC22A10Q63ZE4 541 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SPINK14Q6IE38 97 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 ASRGL1Q7L266 308 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF227Q86WZ6 799 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SPPL2AQ8TCT8 520 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 PAQR8Q8TEZ7 354 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SIGLEC12Q96PQ1 595 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 NODALQ96S42 347 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SECISBP2Q96T21 854 aaKnown RBP13.94□□□□□ -0.18
ATG4D-211ENST00000589753 SH2D2AQ9NP31 389 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 TIMMDC1Q9NPL8 285 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 UBQLN4Q9NRR5 601 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 FLRT3Q9NZU0 649 aa13.94□□□□□ -0.18
ATG4D-211ENST00000589753 CHCHD2Q9Y6H1 151 aaPredicted RBP13.94□□□□□ -0.18
ATG4D-211ENST00000589753 EXPH5Q8NEV8 1989 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 NPIPB9F8W1W9 429 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CXCR6O00574 342 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 SCDO00767 359 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms