RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZNF483Q8TF39 744 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 SMC6Q96SB8 1091 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 DOHHQ9BU89 302 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 EBPLQ9BY08 206 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 FUT8Q9BYC5 575 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 TTTY12Q9BZ98 90 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 WWTR1Q9GZV5 400 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 QRSL1Q9H0R6 528 aaKnown RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 TRIM45Q9H8W5 580 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 IL1RL2Q9HB29 575 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 ZBTB26Q9HCK0 441 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 MID1IP1Q9NPA3 183 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 CHST11Q9NPF2 352 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 DEPPQ9NTK1 212 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 TEX10Q9NXF1 929 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 VPS29Q9UBQ0 182 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 B4GALT7Q9UBV7 327 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 TRPS1Q9UHF7 1281 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 PPIEQ9UNP9 301 aaKnown RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 ENTPD4Q9Y227 616 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 STK38LQ9Y2H1 464 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 FIS1Q9Y3D6 152 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 TIMM22Q9Y584 194 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 CLDN16Q9Y5I7 305 aa7.56□□□□□ -1.2
DNMT1-219ENST00000589349 SPTBN1Q01082 2364 aaKnown RBP7.56□□□□□ -1.2
DNMT1-219ENST00000589349 CPAMD8Q8IZJ3 1885 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 LRRK2Q5S007 2527 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TRGV5A0A0B4J1U4 118 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 A0A1W2PPM1 405 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 A0A1W2PS29 197 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 C1orf226A1L170 272 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TMEM200CA6NKL6 621 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 OR6C76A6NM76 312 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 E9PLN8 166 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 COPEO14579 308 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 PCDH7O60245 1069 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 GLRA3O75311 464 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CLDN14O95500 239 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 RPS17P08708 135 aaKnown RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CSNK2A2P19784 350 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 GDF1P27539 372 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 KRT20P35900 424 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 MAGEA5P43359 124 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TRPC1P48995 793 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 ARFIP1P53367 373 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 PRKAA2P54646 552 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 FBXW4P57775 412 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 HMGCS1Q01581 520 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 E2F2Q14209 437 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 MPEG1Q2M385 716 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CMPK2Q5EBM0 449 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 ZNF678Q5SXM1 525 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 WLSQ5T9L3 541 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 FAM219BQ5XKK7 198 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TIFABQ6ZNK6 161 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 MCEMP1Q8IX19 187 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CMIPQ8IY22 773 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 MMP21Q8N119 569 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 METTL4Q8N3J2 472 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 FAM109AQ8N4B1 249 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TMEM251Q8N6I4 163 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 ZFP62Q8NB50 900 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 OR10G3Q8NGC4 313 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 FAM57AQ8TBR7 257 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 ACMSDQ8TDX5 336 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 SNX33Q8WV41 574 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 RND1Q92730 232 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 EXOSC8Q96B26 276 aaKnown RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CCDC126Q96EE4 140 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TMEM237Q96Q45 408 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 BBS4Q96RK4 519 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 VKORC1Q9BQB6 163 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TP63Q9H3D4 680 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 METTL7AQ9H8H3 244 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CXorf21Q9HAI6 301 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 BRF2Q9HAW0 419 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 TUBA8Q9NY65 449 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-219ENST00000589349 PSD3Q9NYI0 1048 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 UTS2RQ9UKP6 389 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 PTPN13Q12923 2485 aa7.55□□□□□ -1.2
DNMT1-219ENST00000589349 CROCCQ5TZA2 2017 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 ZNF354AO60765 605 aaPredicted RBP7.54□□□□□ -1.2
DNMT1-219ENST00000589349 TMEM127O75204 238 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 SHBGP04278 402 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 IL3P08700 152 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 ANXA4P09525 319 aaPredicted RBP7.54□□□□□ -1.2
DNMT1-219ENST00000589349 CT62P0C5K7 136 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 CHN1P15882 459 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 KRT4P19013 534 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 TCEA1P23193 301 aaKnown RBP7.54□□□□□ -1.2
DNMT1-219ENST00000589349 GCAP28676 217 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 GCKP35557 465 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 RFX3P48380 749 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 TMED10P49755 219 aaKnown RBP7.54□□□□□ -1.2
DNMT1-219ENST00000589349 NAGLUP54802 743 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 PKNOX1P55347 436 aa7.54□□□□□ -1.2
DNMT1-219ENST00000589349 SLC37A1P57057 533 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms