RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OR12D1	P0DN82	309 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CPM	P14384	443 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SPN	P16150	400 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SEPHS1	P49903	392 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	PRKAG1	P54619	331 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	NCS1	P62166	190 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	ID2	Q02363	134 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	FAM53B	Q14153	422 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CARTPT	Q16568	116 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	COLEC12	Q5KU26	742 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CEP68	Q76N32	757 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	TMEM179B	Q7Z7N9	219 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	HIPK1	Q86Z02	1210 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	PLXDC1	Q8IUK5	500 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	OR7G2	Q8NG99	324 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	OR56A1	Q8NGH5	318 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SLC38A4	Q969I6	547 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	MOAP1	Q96BY2	351 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	TPD52L3	Q96J77	140 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SPRTN	Q9H040	489 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	HYKK	A2RU49	373 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	PRAMEF25	A6NGN4	478 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	RGS10	O43665	173 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	ITGA2	P17301	1181 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	PSMB9	P28065	219 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	MAN2A2	P49641	1150 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	CLK1	P49759	484 aa	Known RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	PRR5	P85299	388 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	RIPPLY1	Q0D2K3	151 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	FUT5	Q11128	374 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	KEAP1	Q14145	624 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	LASP1	Q14847	261 aa	Known RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	GARNL3	Q5VVW2	1013 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	WDR74	Q6RFH5	385 aa	Predicted RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	FAM111B	Q6SJ93	734 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	LIX1L	Q8IVB5	337 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	TTC29	Q8NA56	475 aa	Predicted RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	PSD4	Q8NDX1	1056 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	OR2I1P	Q8NGU4	316 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	ANKRD9	Q96BM1	317 aa	Predicted RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	OTUB1	Q96FW1	271 aa	Predicted RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	C16orf58	Q96GQ5	468 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	TRAF4	Q9BUZ4	470 aa	Predicted RBP	14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	GAREM1	Q9H706	876 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	ATP13A2	Q9NQ11	1180 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	TRAPPC4	Q9Y296	219 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	SPACA6	W5XKT8	324 aa		14.38	□□□□□ -0.11
DDX39A-209	ENST00000589318	hCG_2039718	K7EN88	272 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	BCKDK	O14874	412 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	SIGLEC6	O43699	453 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	UGT2B17	O75795	530 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NSA2	O95478	260 aa	Known RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	GPR75	O95800	540 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	RECK	O95980	971 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	FABP3	P05413	133 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PNLIP	P16233	465 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	AGXT	P21549	392 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	UGT2B15	P54855	530 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	HSD11B2	P80365	405 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PPP1R8	Q12972	351 aa	Known RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	SYPL1	Q16563	259 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NDUFA9	Q16795	377 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	ZNF628	Q5EBL2	1059 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	TCTE1	Q5JU00	501 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	GUSBP11	Q6P575	273 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	BHLHB9	Q6PI77	547 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	TMPRSS9	Q7Z410	1059 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	HS3ST5	Q8IZT8	346 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	OR2L13	Q8N349	312 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PARP16	Q8N5Y8	322 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	ZBTB44	Q8NCP5	570 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NUP43	Q8NFH3	380 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	ST6GAL2	Q96JF0	529 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	SLC41A2	Q96JW4	573 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NUDT22	Q9BRQ3	303 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	YIPF4	Q9BSR8	244 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NUAK2	Q9H093	628 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	THUMPD1	Q9NXG2	353 aa	Known RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	RAB23	Q9ULC3	237 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PADI2	Q9Y2J8	665 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	SPEF1	Q9Y4P9	236 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	TMEM184B	Q9Y519	407 aa	Predicted RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PCDHGB6	Q9Y5F9	930 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NIN	Q8N4C6	2090 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	NME6	O75414	186 aa	Predicted RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	DIRAS1	O95057	198 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	ATP1B1	P05026	303 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	CD36	P16671	472 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	TNFRSF1B	P20333	461 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	CNR2	P34972	360 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	DCT	P40126	519 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	KHK	P50053	298 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	LSM3	P62310	102 aa	Known RBP	14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PIGF	Q07326	219 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	SPANXN2	Q5MJ10	180 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	FHL5	Q5TD97	284 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	ZNF767P	Q75MW2	155 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	PRSS42	Q7Z5A4	293 aa		14.37	□□□□□ -0.11
DDX39A-209	ENST00000589318	RAB43	Q86YS6	212 aa		14.37	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms